Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL442128.2-201ENST00000620246 1824 ntBASIC5.09□□□□□ -1.6
CISHQ9NSE2 AC007382.1-201ENST00000624376 2618 ntBASIC5.09□□□□□ -1.6
CISHQ9NSE2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.09□□□□□ -1.6
CISHQ9NSE2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CISHQ9NSE2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CISHQ9NSE2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CISHQ9NSE2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CISHQ9NSE2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 SDAD1P1-202ENST00000524156 2051 ntBASIC5.08□□□□□ -1.6
CISHQ9NSE2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CISHQ9NSE2 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CISHQ9NSE2 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CISHQ9NSE2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 CYCSP11-201ENST00000436426 315 ntBASIC5.08□□□□□ -1.6
CISHQ9NSE2 AL136455.1-201ENST00000441083 1240 ntBASIC5.08□□□□□ -1.6
CISHQ9NSE2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 AL645937.3-201ENST00000453647 936 ntBASIC5.08□□□□□ -1.6
CISHQ9NSE2 RPL35AP28-201ENST00000459730 331 ntBASIC5.08□□□□□ -1.6
CISHQ9NSE2 AC020890.1-201ENST00000491837 504 ntBASIC5.08□□□□□ -1.6
CISHQ9NSE2 AC105233.1-201ENST00000498840 781 ntBASIC5.08□□□□□ -1.6
CISHQ9NSE2 AC073358.1-201ENST00000505671 684 ntBASIC5.08□□□□□ -1.6
CISHQ9NSE2 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 RN7SKP276-201ENST00000516242 268 ntBASIC5.08□□□□□ -1.6
CISHQ9NSE2 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 LSM3P2-201ENST00000551246 273 ntBASIC5.08□□□□□ -1.6
CISHQ9NSE2 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 UBE2FP2-201ENST00000566646 462 ntBASIC5.08□□□□□ -1.6
CISHQ9NSE2 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 AC241377.1-201ENST00000619797 406 ntBASIC5.08□□□□□ -1.6
CISHQ9NSE2 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CISHQ9NSE2 AC107068.1-201ENST00000563286 4218 ntBASIC5.08□□□□□ -1.6
CISHQ9NSE2 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 AL121950.1-201ENST00000624993 2077 ntBASIC5.08□□□□□ -1.6
CISHQ9NSE2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.08□□□□□ -1.6
CISHQ9NSE2 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CISHQ9NSE2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CISHQ9NSE2 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CISHQ9NSE2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 RN7SKP186-201ENST00000365371 303 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 RNA5SP87-201ENST00000384155 118 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 AL590762.2-201ENST00000395798 571 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 RPL7P57-201ENST00000423238 740 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 RPS27P18-201ENST00000431701 247 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 AC079168.2-201ENST00000453977 416 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 AC083982.1-201ENST00000485679 344 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 OR7H2P-201ENST00000513483 306 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 SOX5P1-201ENST00000524155 1127 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 AC023389.2-201ENST00000580031 955 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 MIR4433B-201ENST00000581329 102 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 AC007448.1-201ENST00000582714 234 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 AC125494.2-201ENST00000602431 657 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 AL049539.1-201ENST00000611964 459 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 AC091953.3-201ENST00000623220 236 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 AP000550.3-201ENST00000637734 379 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CISHQ9NSE2 AL359922.3-201ENST00000624779 1670 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CISHQ9NSE2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CISHQ9NSE2 AL445487.1-201ENST00000415694 1580 ntBASIC5.07□□□□□ -1.6
CISHQ9NSE2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CISHQ9NSE2 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CISHQ9NSE2 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CISHQ9NSE2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.07□□□□□ -1.6
CISHQ9NSE2 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.06□□□□□ -1.6
CISHQ9NSE2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CISHQ9NSE2 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CISHQ9NSE2 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CISHQ9NSE2 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CISHQ9NSE2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms