Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 RN7SKP216-201ENST00000411050 312 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC073464.3-201ENST00000422564 712 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 RPL7P56-201ENST00000429441 717 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 MRPS33P4-201ENST00000434892 317 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC004854.1-201ENST00000440356 349 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 CBX1P2-201ENST00000453841 458 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC009127.1-201ENST00000467090 155 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC090114.3-201ENST00000479267 829 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 RPS4XP20-201ENST00000505751 772 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC112198.4-201ENST00000515450 351 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AP000676.2-201ENST00000529711 301 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC122688.1-201ENST00000541494 223 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AF230666.2-201ENST00000602328 725 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC091057.3-201ENST00000602684 733 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC095055.1-201ENST00000603472 1113 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC120053.1-201ENST00000607706 736 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC084036.1-201ENST00000609190 508 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC100847.1-201ENST00000611316 481 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AL049539.1-201ENST00000611964 459 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AC009159.2-201ENST00000617603 606 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AL590410.1-201ENST00000617925 333 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AL138955.1-201ENST00000622881 1040 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 FRG1EP-201ENST00000634469 770 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AL138820.1-201ENST00000617901 5305 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AL078621.3-201ENST00000623707 2042 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 RNA5SP443-201ENST00000363083 132 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 RN7SKP103-201ENST00000363848 320 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 RNU4-4P-201ENST00000364588 130 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 MIR105-1-201ENST00000385222 81 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AL109941.1-201ENST00000401925 229 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 RPL37P18-201ENST00000411602 243 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC211486.3-201ENST00000412694 621 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 RBMY2KP-201ENST00000418221 992 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC092634.2-201ENST00000428146 1010 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 RPL12P17-201ENST00000432393 498 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 PA2G4P6-201ENST00000438325 1197 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AL359265.1-201ENST00000440296 795 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 IGBP1P3-201ENST00000447449 1000 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 C1DP3-201ENST00000455013 423 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC092754.1-201ENST00000472975 479 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 RNA5SP373-201ENST00000517271 95 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 SEPT10P1-201ENST00000517342 1162 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 OR5D15P-201ENST00000531671 942 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC006116.7-201ENST00000590141 756 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AP000769.2-201ENST00000602344 396 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC064807.4-201ENST00000607201 407 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AP001033.2-201ENST00000609701 1003 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AP001784.1-201ENST00000624107 428 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC013437.2-201ENST00000639587 677 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 CASC19-281ENST00000642118 1554 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 AC112255.1-201ENST00000624070 2493 ntBASIC5.53□□□□□ -1.52
EBF3Q9H4W6 ABCC13-202ENST00000463099 3842 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms