Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 H3F3BP2-201ENST00000583907 357 ntBASIC5.17□□□□□ -1.58
TRIM4Q9C037 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 AC008745.1-201ENST00000604064 271 ntBASIC5.17□□□□□ -1.58
TRIM4Q9C037 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.17□□□□□ -1.58
TRIM4Q9C037 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM4Q9C037 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM4Q9C037 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM4Q9C037 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 AC003973.3-201ENST00000624863 2822 ntBASIC5.17□□□□□ -1.58
TRIM4Q9C037 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM4Q9C037 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM4Q9C037 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM4Q9C037 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 RNU4-2-201ENST00000365668 141 ntBASIC5.16□□□□□ -1.58
TRIM4Q9C037 SNORA16A-201ENST00000384342 137 ntBASIC5.16□□□□□ -1.58
TRIM4Q9C037 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 AC092647.3-201ENST00000443044 633 ntBASIC5.16□□□□□ -1.58
TRIM4Q9C037 AC090804.1-201ENST00000448870 490 ntBASIC5.16□□□□□ -1.58
TRIM4Q9C037 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 AC134698.5-201ENST00000519444 336 ntBASIC5.16□□□□□ -1.58
TRIM4Q9C037 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.16□□□□□ -1.58
TRIM4Q9C037 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 PPATP2-201ENST00000605635 508 ntBASIC5.16□□□□□ -1.58
TRIM4Q9C037 AL023583.1-201ENST00000607518 1143 ntBASIC5.16□□□□□ -1.58
TRIM4Q9C037 MIR6758-201ENST00000620653 63 ntBASIC5.16□□□□□ -1.58
TRIM4Q9C037 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 AC073869.8-201ENST00000641806 335 ntBASIC5.16□□□□□ -1.58
TRIM4Q9C037 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM4Q9C037 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM4Q9C037 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM4Q9C037 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM4Q9C037 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
TRIM4Q9C037 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
TRIM4Q9C037 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM4Q9C037 MAPK10-286ENST00000641208 8747 ntBASIC5.15□□□□□ -1.58
TRIM4Q9C037 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
TRIM4Q9C037 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM4Q9C037 RNU1-43P-201ENST00000365052 165 ntBASIC5.15□□□□□ -1.59
TRIM4Q9C037 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM4Q9C037 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM4Q9C037 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.15□□□□□ -1.59
TRIM4Q9C037 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.15□□□□□ -1.59
TRIM4Q9C037 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM4Q9C037 EIF2S2P5-201ENST00000457635 968 ntBASIC5.15□□□□□ -1.59
TRIM4Q9C037 AC007537.2-201ENST00000472093 511 ntBASIC5.15□□□□□ -1.59
TRIM4Q9C037 IGBP1P4-201ENST00000503202 879 ntBASIC5.15□□□□□ -1.59
TRIM4Q9C037 AC073358.1-201ENST00000505671 684 ntBASIC5.15□□□□□ -1.59
TRIM4Q9C037 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.15□□□□□ -1.59
TRIM4Q9C037 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM4Q9C037 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM4Q9C037 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM4Q9C037 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM4Q9C037 ATP5J2P6-201ENST00000565203 266 ntBASIC5.15□□□□□ -1.59
TRIM4Q9C037 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM4Q9C037 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM4Q9C037 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM4Q9C037 AL020997.2-201ENST00000602607 184 ntBASIC5.15□□□□□ -1.59
TRIM4Q9C037 RNU6-84P-201ENST00000607737 102 ntBASIC5.15□□□□□ -1.59
TRIM4Q9C037 OR7M1P-201ENST00000608946 533 ntBASIC5.15□□□□□ -1.59
TRIM4Q9C037 LINC00901.1-201ENST00000617252 152 ntBASIC5.15□□□□□ -1.59
TRIM4Q9C037 MIR7641-1-201ENST00000627518 61 ntBASIC5.15□□□□□ -1.59
TRIM4Q9C037 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM4Q9C037 AC104118.1-201ENST00000607625 1589 ntBASIC5.15□□□□□ -1.59
TRIM4Q9C037 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM4Q9C037 AC139713.2-215ENST00000641428 5037 ntBASIC5.15□□□□□ -1.59
TRIM4Q9C037 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
TRIM4Q9C037 DDX18P6-201ENST00000450119 1997 ntBASIC5.15□□□□□ -1.59
TRIM4Q9C037 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TRIM4Q9C037 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM4Q9C037 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM4Q9C037 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM4Q9C037 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM4Q9C037 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
TRIM4Q9C037 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM4Q9C037 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM4Q9C037 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM4Q9C037 DBIP1-201ENST00000401435 260 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms