Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 OR7E11P-202ENST00000642027 1491 ntBASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 AC010401.2-201ENST00000575137 4934 ntBASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 LARS-212ENST00000510191 3737 ntTSL 2 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 DLD-205ENST00000440410 1993 ntTSL 2 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 AC016583.1-201ENST00000624221 2431 ntBASIC2.05□□□□□ -2.08
LCE3DQ9BYE3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 PLA2G2C-201ENST00000247992 453 ntAPPRIS P5 TSL 5 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 TTTY8B-201ENST00000328819 531 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 TTTY8-201ENST00000329684 531 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 RPL7P26-201ENST00000333817 754 ntBASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 IGFL3-201ENST00000341415 662 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 GSTZ1-203ENST00000361389 1010 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 MIRLET7E-201ENST00000362102 79 ntBASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 RNA5SP145-201ENST00000363124 125 ntBASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 RNY1P12-201ENST00000364251 105 ntBASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 RNU6-343P-201ENST00000364709 104 ntBASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 RNU6-169P-201ENST00000365336 107 ntBASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 RN7SKP204-201ENST00000365481 310 ntBASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 AC106795.2-203ENST00000366189 511 ntTSL 5 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 FANK1-201ENST00000368689 522 ntTSL 3 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 SSX6-201ENST00000376932 562 ntBASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 Y_RNA.394-201ENST00000383942 103 ntBASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 SNORA68-201ENST00000384437 133 ntBASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 SNORA14B-201ENST00000384452 135 ntBASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 RNU6-456P-201ENST00000384493 107 ntBASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 MIR640-201ENST00000385086 96 ntBASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 FCRL6-204ENST00000392235 947 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 RPL7P60-201ENST00000397636 735 ntBASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 RPL24P7-201ENST00000399435 453 ntBASIC2.04□□□□□ -2.08
LCE3DQ9BYE3 EIF5P1-201ENST00000400019 1231 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms