Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 BTG4P1-201ENST00000510421 183 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 RNA5SP43-201ENST00000516559 110 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 DPRXP4-201ENST00000578053 568 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 RNF138P2-201ENST00000603490 592 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 AL451049.1-201ENST00000608672 497 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 AC126915.2-201ENST00000610957 190 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 AL627230.1-201ENST00000613077 211 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 AL591926.8-201ENST00000616876 211 ntBASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HDHD3Q9BSH5 AC008758.3-201ENST00000507003 1829 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 Y_RNA.62-201ENST00000362840 99 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 RNU1-83P-201ENST00000363426 164 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 SNORD96B-201ENST00000386148 79 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 OOSP1-201ENST00000398992 1270 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AL136116.2-201ENST00000404020 785 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AC096644.3-201ENST00000416788 338 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AF186996.5-201ENST00000418098 904 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AC012519.1-201ENST00000424588 610 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 NMNAT1P2-201ENST00000435192 860 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 OR7E125P-201ENST00000443450 846 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AL163193.1-201ENST00000444895 788 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 KNOP1P3-201ENST00000446933 426 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 FAR2P1-206ENST00000449736 709 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AL445433.1-201ENST00000457507 257 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 RPL7P39-201ENST00000481157 744 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 HMGN2P25-201ENST00000486956 268 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AC024558.1-201ENST00000505008 528 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 RNA5SP464-201ENST00000516251 108 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 RN7SKP260-201ENST00000516907 149 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 NMNAT1P1-201ENST00000554095 876 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AL049839.1-201ENST00000556151 657 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AC087783.2-201ENST00000605070 562 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 OR7M1P-201ENST00000608946 533 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 MIR6861-201ENST00000618657 64 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 CASC19-281ENST00000642118 1554 ntBASIC4.09□□□□□ -1.75
HDHD3Q9BSH5 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HDHD3Q9BSH5 KARSP1-201ENST00000451871 1752 ntBASIC4.09□□□□□ -1.76
HDHD3Q9BSH5 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
HDHD3Q9BSH5 CDC27P2-201ENST00000425026 1922 ntBASIC4.09□□□□□ -1.76
HDHD3Q9BSH5 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
HDHD3Q9BSH5 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 RNU6-670P-201ENST00000364312 104 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 RNA5SP455-201ENST00000365190 119 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 OR3A2-201ENST00000408891 1076 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 AL356968.2-201ENST00000412769 1257 ntBASIC4.08□□□□□ -1.76
HDHD3Q9BSH5 NPM1P4-201ENST00000414095 812 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms