Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS35Q96QK1 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS35Q96QK1 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
VPS35Q96QK1 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.06□□□□□ -1.6
VPS35Q96QK1 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS35Q96QK1 AC000123.3-201ENST00000624029 4975 ntBASIC5.06□□□□□ -1.6
VPS35Q96QK1 AC104623.2-202ENST00000623477 4002 ntBASIC5.06□□□□□ -1.6
VPS35Q96QK1 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS35Q96QK1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS35Q96QK1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS35Q96QK1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS35Q96QK1 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS35Q96QK1 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS35Q96QK1 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS35Q96QK1 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 AC007618.1-201ENST00000366455 732 ntBASIC5.05□□□□□ -1.6
VPS35Q96QK1 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 RNU6-1320P-201ENST00000390838 107 ntBASIC5.05□□□□□ -1.6
VPS35Q96QK1 RNU6-1269P-201ENST00000391139 107 ntBASIC5.05□□□□□ -1.6
VPS35Q96QK1 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 AC106901.1-201ENST00000425086 698 ntBASIC5.05□□□□□ -1.6
VPS35Q96QK1 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 AC073850.1-201ENST00000449243 255 ntBASIC5.05□□□□□ -1.6
VPS35Q96QK1 RNU6-599P-201ENST00000459383 107 ntBASIC5.05□□□□□ -1.6
VPS35Q96QK1 RNU6-1193P-201ENST00000459461 107 ntBASIC5.05□□□□□ -1.6
VPS35Q96QK1 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 AC005000.1-201ENST00000536192 288 ntBASIC5.05□□□□□ -1.6
VPS35Q96QK1 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS35Q96QK1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS35Q96QK1 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 NPM1P45-201ENST00000583151 559 ntBASIC5.05□□□□□ -1.6
VPS35Q96QK1 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 AC018695.5-201ENST00000605872 315 ntBASIC5.05□□□□□ -1.6
VPS35Q96QK1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 RNU6-368P-201ENST00000620928 107 ntBASIC5.05□□□□□ -1.6
VPS35Q96QK1 RNU6-538P-201ENST00000622329 107 ntBASIC5.05□□□□□ -1.6
VPS35Q96QK1 AP002799.1-201ENST00000623552 423 ntBASIC5.05□□□□□ -1.6
VPS35Q96QK1 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS35Q96QK1 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS35Q96QK1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS35Q96QK1 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS35Q96QK1 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VPS35Q96QK1 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS35Q96QK1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS35Q96QK1 NEAT1-202ENST00000501122 22743 ntBASIC5.04□□□□□ -1.6
VPS35Q96QK1 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS35Q96QK1 TRIM51GP-201ENST00000534741 1350 ntBASIC5.04□□□□□ -1.6
VPS35Q96QK1 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS35Q96QK1 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS35Q96QK1 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VPS35Q96QK1 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VPS35Q96QK1 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS35Q96QK1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS35Q96QK1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS35Q96QK1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
VPS35Q96QK1 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS35Q96QK1 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS35Q96QK1 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS35Q96QK1 AL078599.1-201ENST00000402075 293 ntBASIC5.04□□□□□ -1.6
VPS35Q96QK1 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.04□□□□□ -1.6
VPS35Q96QK1 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS35Q96QK1 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS35Q96QK1 ARAFP1-201ENST00000422172 605 ntBASIC5.04□□□□□ -1.6
VPS35Q96QK1 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS35Q96QK1 AC004980.3-201ENST00000447046 365 ntBASIC5.04□□□□□ -1.6
VPS35Q96QK1 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS35Q96QK1 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS35Q96QK1 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS35Q96QK1 AC091180.1-201ENST00000462104 372 ntBASIC5.04□□□□□ -1.6
VPS35Q96QK1 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS35Q96QK1 AC022336.1-201ENST00000475510 337 ntBASIC5.04□□□□□ -1.6
VPS35Q96QK1 HMGN2P25-201ENST00000486956 268 ntBASIC5.04□□□□□ -1.6
VPS35Q96QK1 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VPS35Q96QK1 AC147055.3-201ENST00000510547 851 ntBASIC5.04□□□□□ -1.6
VPS35Q96QK1 RN7SKP66-201ENST00000516681 231 ntBASIC5.04□□□□□ -1.6
VPS35Q96QK1 OR7E128P-201ENST00000532736 1024 ntBASIC5.04□□□□□ -1.6
VPS35Q96QK1 TRAV11-201ENST00000539512 339 ntBASIC5.04□□□□□ -1.6
VPS35Q96QK1 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS35Q96QK1 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VPS35Q96QK1 AL512310.9-201ENST00000553311 948 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms