Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC134503.1-201ENST00000633048 54 ntBASIC7.93□□□□□ -1.14
TRIM47Q96LD4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
TRIM47Q96LD4 AC099063.3-201ENST00000642066 185 ntBASIC7.93□□□□□ -1.14
TRIM47Q96LD4 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM47Q96LD4 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.93□□□□□ -1.14
TRIM47Q96LD4 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.93□□□□□ -1.14
TRIM47Q96LD4 NCOA4P3-201ENST00000513203 1877 ntBASIC7.93□□□□□ -1.14
TRIM47Q96LD4 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM47Q96LD4 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM47Q96LD4 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM47Q96LD4 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM47Q96LD4 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
TRIM47Q96LD4 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.93□□□□□ -1.14
TRIM47Q96LD4 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
TRIM47Q96LD4 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 RNU6-252P-201ENST00000363232 107 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 RN7SKP77-201ENST00000363261 353 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AL590762.1-201ENST00000391782 432 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AC016769.2-201ENST00000414815 475 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AC007679.3-201ENST00000434035 414 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AL645939.3-201ENST00000435408 225 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 OR6C5P-201ENST00000452388 923 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AL121877.1-201ENST00000453704 622 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 RN7SL413P-201ENST00000482700 297 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 RN7SL362P-201ENST00000494228 267 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 RNA5SP278-201ENST00000517055 102 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 NXPE2P1-201ENST00000543705 726 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AL355375.2-201ENST00000574825 175 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 MIR3149-201ENST00000584629 83 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 BNIP3P10-201ENST00000605360 577 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AC104184.1-201ENST00000607513 721 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AL590282.1-201ENST00000610379 1136 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AC007342.8-201ENST00000623278 678 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AC116563.2-201ENST00000624751 535 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AL121949.2-201ENST00000403446 1548 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AL021877.2-201ENST00000624442 10684 ntBASIC7.92□□□□□ -1.14
TRIM47Q96LD4 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM47Q96LD4 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM47Q96LD4 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
TRIM47Q96LD4 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM47Q96LD4 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.91□□□□□ -1.14
TRIM47Q96LD4 AC022819.1-201ENST00000563495 3910 ntBASIC7.91□□□□□ -1.14
TRIM47Q96LD4 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM47Q96LD4 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.91□□□□□ -1.14
TRIM47Q96LD4 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
TRIM47Q96LD4 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.91□□□□□ -1.14
TRIM47Q96LD4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
TRIM47Q96LD4 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
TRIM47Q96LD4 SNORD56.2-201ENST00000363242 71 ntBASIC7.91□□□□□ -1.14
TRIM47Q96LD4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
TRIM47Q96LD4 PRELID1P1-201ENST00000403549 660 ntBASIC7.91□□□□□ -1.14
TRIM47Q96LD4 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM47Q96LD4 RPL5P18-201ENST00000406671 891 ntBASIC7.91□□□□□ -1.14
TRIM47Q96LD4 RNU2-3P-201ENST00000410144 191 ntBASIC7.91□□□□□ -1.14
TRIM47Q96LD4 RAB28P1-201ENST00000411517 641 ntBASIC7.91□□□□□ -1.14
TRIM47Q96LD4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.91□□□□□ -1.14
TRIM47Q96LD4 AL353193.1-201ENST00000421444 268 ntBASIC7.91□□□□□ -1.14
TRIM47Q96LD4 AC069157.1-201ENST00000421749 137 ntBASIC7.91□□□□□ -1.14
TRIM47Q96LD4 AC008753.1-201ENST00000423096 284 ntBASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms