Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RPS3AP6-201ENST00000484430 795 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 RPS27AP16-201ENST00000492222 470 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 AC114322.1-201ENST00000506771 926 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 AC109481.1-201ENST00000509173 282 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 AC097486.1-201ENST00000515331 210 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 RN7SKP265-201ENST00000516448 223 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.13□□□□□ -1.43
HPS3Q969F9 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.13□□□□□ -1.43
HPS3Q969F9 AC010487.1-201ENST00000594408 1172 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.13□□□□□ -1.43
HPS3Q969F9 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 AC008115.3-201ENST00000614874 549 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 MIR6133-201ENST00000617057 108 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 RNA5SP439-201ENST00000617595 124 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 AC011815.3-201ENST00000624194 473 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HPS3Q969F9 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.13□□□□□ -1.43
HPS3Q969F9 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.13□□□□□ -1.43
HPS3Q969F9 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HPS3Q969F9 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
HPS3Q969F9 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.13□□□□□ -1.43
HPS3Q969F9 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HPS3Q969F9 AC109446.4-201ENST00000623235 2755 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HPS3Q969F9 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HPS3Q969F9 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HPS3Q969F9 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.12□□□□□ -1.43
HPS3Q969F9 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HPS3Q969F9 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HPS3Q969F9 MIR323A-201ENST00000362199 86 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 SNORA51.1-201ENST00000363243 140 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 RN7SKP145-201ENST00000363291 303 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 RN7SKP81-201ENST00000365603 331 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HPS3Q969F9 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HPS3Q969F9 RNU6-452P-201ENST00000384406 107 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.12□□□□□ -1.43
HPS3Q969F9 AL603865.2-201ENST00000401679 213 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 RPL7P27-201ENST00000403775 720 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 AL136131.1-201ENST00000406079 803 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 AP000357.1-201ENST00000409926 1165 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HPS3Q969F9 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.12□□□□□ -1.43
HPS3Q969F9 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HPS3Q969F9 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.12□□□□□ -1.43
HPS3Q969F9 RPL7P45-201ENST00000455851 743 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HPS3Q969F9 AC107015.1-201ENST00000466902 747 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 AC093720.1-201ENST00000505681 714 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 GLUD1P3-202ENST00000508551 200 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 MTATP6P1-201ENST00000514057 681 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HPS3Q969F9 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.12□□□□□ -1.43
HPS3Q969F9 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.12□□□□□ -1.43
HPS3Q969F9 AP001207.2-201ENST00000519490 539 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.12□□□□□ -1.43
HPS3Q969F9 MORF4L1P3-201ENST00000525966 950 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 AC027544.3-201ENST00000535082 757 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.12□□□□□ -1.43
HPS3Q969F9 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HPS3Q969F9 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.12□□□□□ -1.43
HPS3Q969F9 MTATP6P24-201ENST00000576835 677 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 MIR3614-201ENST00000581261 86 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 SS18L2P2-201ENST00000583960 235 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 RN7SL622P-201ENST00000585292 275 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.12□□□□□ -1.43
HPS3Q969F9 AP001160.4-201ENST00000596971 382 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.12□□□□□ -1.43
HPS3Q969F9 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.12□□□□□ -1.43
HPS3Q969F9 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HPS3Q969F9 AL356274.1-201ENST00000617064 410 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 AC008115.4-201ENST00000619780 775 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 AC015660.5-201ENST00000623238 564 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 AL356863.1-201ENST00000623378 1080 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 MAPK10-338ENST00000641647 3362 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
HPS3Q969F9 AL137141.1-201ENST00000624622 4836 ntBASIC6.12□□□□□ -1.43
HPS3Q969F9 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HPS3Q969F9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HPS3Q969F9 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.12□□□□□ -1.43
HPS3Q969F9 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HPS3Q969F9 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HPS3Q969F9 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HPS3Q969F9 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HPS3Q969F9 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.11□□□□□ -1.43
HPS3Q969F9 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HPS3Q969F9 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HPS3Q969F9 AC017007.4-201ENST00000503353 1352 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HPS3Q969F9 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HPS3Q969F9 SEPT7P7-201ENST00000420492 1301 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HPS3Q969F9 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HPS3Q969F9 AL031985.1-201ENST00000392713 418 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 AL512422.1-201ENST00000407033 553 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS3Q969F9 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 DPY19L1P2-201ENST00000426647 915 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms