Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.42□□□□□ -1.38
ERCC4Q92889 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.42□□□□□ -1.38
ERCC4Q92889 TOMM20P1-201ENST00000534518 427 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.42□□□□□ -1.38
ERCC4Q92889 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.42□□□□□ -1.38
ERCC4Q92889 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.42□□□□□ -1.38
ERCC4Q92889 MIR4789-201ENST00000577469 82 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.42□□□□□ -1.38
ERCC4Q92889 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC6.42□□□□□ -1.38
ERCC4Q92889 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ERCC4Q92889 AC010620.1-201ENST00000601088 1102 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 AL353778.1-201ENST00000603149 408 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 MTCO2P22-201ENST00000603246 681 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 AC092266.1-201ENST00000610958 165 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.42□□□□□ -1.38
ERCC4Q92889 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ERCC4Q92889 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.42□□□□□ -1.38
ERCC4Q92889 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
ERCC4Q92889 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.42□□□□□ -1.38
ERCC4Q92889 ZNF849P-201ENST00000594711 1566 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ERCC4Q92889 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ERCC4Q92889 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ERCC4Q92889 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
ERCC4Q92889 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.42□□□□□ -1.38
ERCC4Q92889 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ERCC4Q92889 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
ERCC4Q92889 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
ERCC4Q92889 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
ERCC4Q92889 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.41□□□□□ -1.38
ERCC4Q92889 AC011503.2-201ENST00000594230 1500 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
ERCC4Q92889 HSPD1P9-201ENST00000420325 1636 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
ERCC4Q92889 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
ERCC4Q92889 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.41□□□□□ -1.38
ERCC4Q92889 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ERCC4Q92889 SNORD116-1-201ENST00000384335 95 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 RPL11P3-201ENST00000395256 523 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.41□□□□□ -1.38
ERCC4Q92889 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC6.41□□□□□ -1.38
ERCC4Q92889 AL121878.1-201ENST00000418638 859 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.41□□□□□ -1.38
ERCC4Q92889 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.41□□□□□ -1.38
ERCC4Q92889 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.41□□□□□ -1.38
ERCC4Q92889 AL353898.1-201ENST00000444055 238 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 AC069540.1-201ENST00000446320 988 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.41□□□□□ -1.38
ERCC4Q92889 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.41□□□□□ -1.38
ERCC4Q92889 AC011037.1-201ENST00000483964 558 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 RPL32P33-201ENST00000487023 394 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.41□□□□□ -1.38
ERCC4Q92889 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.41□□□□□ -1.38
ERCC4Q92889 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.41□□□□□ -1.38
ERCC4Q92889 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.41□□□□□ -1.38
ERCC4Q92889 LRRC6P1-201ENST00000532188 885 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
ERCC4Q92889 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.41□□□□□ -1.38
ERCC4Q92889 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.41□□□□□ -1.38
ERCC4Q92889 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.41□□□□□ -1.38
ERCC4Q92889 LINC00556-201ENST00000569603 412 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 AL499605.1-201ENST00000604628 403 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 AC009318.3-201ENST00000616916 503 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.41□□□□□ -1.38
ERCC4Q92889 AC013470.4-201ENST00000619978 986 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.41□□□□□ -1.38
ERCC4Q92889 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
ERCC4Q92889 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.41□□□□□ -1.38
ERCC4Q92889 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
ERCC4Q92889 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ERCC4Q92889 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
ERCC4Q92889 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ERCC4Q92889 AC117409.1-201ENST00000470499 1310 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ERCC4Q92889 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
ERCC4Q92889 AC093225.1-201ENST00000506867 1408 ntBASIC6.41□□□□□ -1.38
ERCC4Q92889 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.41□□□□□ -1.38
ERCC4Q92889 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.4□□□□□ -1.38
ERCC4Q92889 QRSL1P1-201ENST00000400977 1540 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
ERCC4Q92889 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
ERCC4Q92889 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
ERCC4Q92889 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.4□□□□□ -1.38
ERCC4Q92889 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.4□□□□□ -1.38
ERCC4Q92889 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
ERCC4Q92889 AC007938.2-201ENST00000604666 2634 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 AC003985.2-201ENST00000562268 1669 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ERCC4Q92889 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
ERCC4Q92889 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ERCC4Q92889 RN7SKP145-201ENST00000363291 303 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ERCC4Q92889 RNU6-636P-201ENST00000384598 107 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 RNU6-932P-201ENST00000391108 106 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 AL136310.1-201ENST00000404926 654 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 RN7SKP278-201ENST00000410504 342 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.4□□□□□ -1.38
ERCC4Q92889 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.4□□□□□ -1.38
ERCC4Q92889 MTND4P3-201ENST00000417829 541 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms