Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 RLIMP2-201ENST00000427891 1563 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 RNU6-40P-201ENST00000384254 107 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 RN7SKP59-201ENST00000410520 314 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 USP9YP19-201ENST00000412165 485 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 RPL36AP10-201ENST00000421785 322 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 OR5M12P-201ENST00000423388 929 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 CHEK2P5-201ENST00000423877 246 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 SRSF1P1-201ENST00000424058 520 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 RPS26P4-201ENST00000431743 355 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 CYCSP6-201ENST00000434498 302 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 MTND2P25-201ENST00000449028 610 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 HMGB1P3-201ENST00000502802 616 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AC073358.1-201ENST00000505671 684 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AC106872.4-201ENST00000510050 523 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AP004607.2-201ENST00000533949 322 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AC087888.1-201ENST00000550884 1254 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 SUGT1P3-202ENST00000604259 383 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AC135803.1-201ENST00000608748 565 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AC079395.2-201ENST00000610982 737 ntBASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CFAP61Q8NHU2 AC110792.3-201ENST00000595906 1614 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 SNORD51.1-201ENST00000365405 77 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 SNORA79B-201ENST00000410557 148 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 AC019070.1-201ENST00000415008 1024 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 NAP1L4P2-201ENST00000425958 899 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 NPM1P22-201ENST00000427761 952 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 AL121776.1-201ENST00000429337 372 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 MTND2P21-201ENST00000436242 1042 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 RPL35AP21-201ENST00000437667 333 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 RPL7L1P4-201ENST00000513004 707 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 BLZF2P-201ENST00000553776 1130 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 RBM22P1-201ENST00000578589 1214 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 SNORD91B-202ENST00000608459 222 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 CR589904.2-201ENST00000612533 440 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 MIR6729-201ENST00000618194 65 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 MIR4302-201ENST00000638058 60 ntBASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.3□□□□□ -1.56
CFAP61Q8NHU2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CFAP61Q8NHU2 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CFAP61Q8NHU2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CFAP61Q8NHU2 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.29□□□□□ -1.56
CFAP61Q8NHU2 NEAT1-202ENST00000501122 22743 ntBASIC5.29□□□□□ -1.56
CFAP61Q8NHU2 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CFAP61Q8NHU2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.29□□□□□ -1.56
CFAP61Q8NHU2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CFAP61Q8NHU2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms