Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 MVP-219ENST00000629059 120 ntTSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 RNA5-8SP5-201ENST00000365304 152 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 SDHCP2-201ENST00000398565 501 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 NPM1P21-201ENST00000513394 762 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 PAICSP4-201ENST00000517543 1253 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 uc_338.13-201ENST00000618243 179 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 UGP2-232ENST00000640075 567 ntTSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 AL133268.1-201ENST00000405676 1401 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 CTSL3P-202ENST00000412179 788 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 ATP5G1P3-201ENST00000463301 410 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 GAPDHP36-201ENST00000480688 918 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 AC079064.1-201ENST00000528365 362 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 AL159169.3-201ENST00000608871 561 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 EIF3EP2-201ENST00000423042 1814 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 AC004076.2-201ENST00000620532 3323 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 RNU1-24P-201ENST00000364285 165 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 LINC02210-201ENST00000444561 288 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 AC090804.1-201ENST00000448870 490 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 TMEM30CP-203ENST00000637814 1035 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 MAPK10-372ENST00000641954 3413 ntBASIC2.54□□□□□ -2
HMCN2Q8NDA2 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
HMCN2Q8NDA2 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC2.54□□□□□ -2
HMCN2Q8NDA2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC2.53□□□□□ -2
HMCN2Q8NDA2 SEPT10P1-201ENST00000517342 1162 ntBASIC2.53□□□□□ -2
HMCN2Q8NDA2 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC2.53□□□□□ -2
HMCN2Q8NDA2 AC087477.6-201ENST00000559595 843 ntBASIC2.53□□□□□ -2
HMCN2Q8NDA2 NDUFB4P11-201ENST00000560510 395 ntBASIC2.53□□□□□ -2
HMCN2Q8NDA2 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC2.53□□□□□ -2
HMCN2Q8NDA2 AC005972.3-201ENST00000606304 481 ntBASIC2.53□□□□□ -2
HMCN2Q8NDA2 AL356608.1-201ENST00000610034 820 ntBASIC2.53□□□□□ -2
HMCN2Q8NDA2 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC2.53□□□□□ -2
HMCN2Q8NDA2 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC2.53□□□□□ -2
HMCN2Q8NDA2 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
HMCN2Q8NDA2 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HMCN2Q8NDA2 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC2.53□□□□□ -2
HMCN2Q8NDA2 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HMCN2Q8NDA2 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
HMCN2Q8NDA2 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HMCN2Q8NDA2 MTCO1P12-201ENST00000414273 1543 ntBASIC2.53□□□□□ -2
HMCN2Q8NDA2 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC2.53□□□□□ -2
HMCN2Q8NDA2 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
HMCN2Q8NDA2 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC2.53□□□□□ -2
HMCN2Q8NDA2 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC2.53□□□□□ -2
HMCN2Q8NDA2 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms