Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC099063.2-201ENST00000446360 662 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 PFN1P8-201ENST00000497012 543 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 SUMO2P5-201ENST00000506790 245 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 HMGN1P9-201ENST00000515212 298 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC010376.1-201ENST00000522101 334 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 OR8G5-201ENST00000524943 1041 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC118942.1-201ENST00000529674 1035 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 NPM1P35-201ENST00000533043 868 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC087894.1-201ENST00000538359 518 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 SETP1-201ENST00000556014 845 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AL390726.5-202ENST00000564800 256 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC005726.4-201ENST00000582858 458 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC011492.1-201ENST00000600023 315 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC100767.2-201ENST00000604840 693 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AL592494.3-201ENST00000609485 464 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 RNU6-1192P-201ENST00000612197 107 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC008115.3-201ENST00000614874 549 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 RNU6-489P-201ENST00000618289 107 ntBASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.02□□□□□ -1.61
CLIP4Q8N3C7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC092111.2-201ENST00000611627 1414 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC023490.2-201ENST00000359859 470 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 RNA5SP241-201ENST00000391326 114 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 OR6E1P-201ENST00000414424 923 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 BX664727.1-201ENST00000416024 466 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 RPS3P2-201ENST00000421346 701 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 ELOCP11-201ENST00000436690 332 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 ELOCP16-201ENST00000444494 332 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 RPL7P61-201ENST00000451721 751 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 OR52E3P-201ENST00000452083 936 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 OR11I1P-201ENST00000486033 954 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC005412.2-201ENST00000492004 341 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 PSMA2P2-201ENST00000504319 686 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 PRELID3BP5-201ENST00000508612 460 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC109481.1-201ENST00000509173 282 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC109464.1-201ENST00000511091 819 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 SNORD46.2-201ENST00000516021 102 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 EEF1A1P37-201ENST00000522748 715 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 MORF4L1P3-201ENST00000525966 950 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC007342.5-201ENST00000571340 2142 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AP001160.4-201ENST00000596971 382 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC012616.1-201ENST00000600294 197 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC009464.1-201ENST00000615731 469 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AL118522.2-201ENST00000616045 615 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC241377.1-201ENST00000619797 406 ntBASIC5.01□□□□□ -1.61
CLIP4Q8N3C7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms