Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 Y_RNA.132-201ENST00000363421 102 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 RNU6-707P-201ENST00000364647 95 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 Y_RNA.279-201ENST00000364763 95 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 RN7SKP130-201ENST00000364924 301 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 RNA5SP152-201ENST00000365184 110 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 RN7SKP91-201ENST00000410852 288 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 RPS7P8-201ENST00000418311 581 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AL121776.1-201ENST00000429337 372 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 SUMO2P8-201ENST00000434672 286 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 SPRYD7P1-201ENST00000443861 570 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 Z80107.2-201ENST00000445127 392 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 PFN1P11-201ENST00000445829 389 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 RPL7AP23-201ENST00000482625 776 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 RN7SL350P-201ENST00000492591 299 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC009567.2-201ENST00000502989 349 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC091849.1-201ENST00000509920 121 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AP005902.2-201ENST00000518393 307 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 IGHV3-57-201ENST00000520143 280 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC233280.2-201ENST00000603917 1070 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 MIR6885-201ENST00000612241 66 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AL121890.2-201ENST00000617644 465 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC069209.1-201ENST00000619282 651 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 SNX18P10-201ENST00000625014 519 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC095038.1-201ENST00000429248 1591 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AL590763.1-201ENST00000398297 1545 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AL117339.4-201ENST00000608335 7063 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 RBPJP6-201ENST00000411556 1431 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 AC106872.5-201ENST00000508856 1416 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 OR4K15-201ENST00000305051 1216 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 Y_RNA.58-201ENST00000362807 102 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 Y_RNA.138-201ENST00000363462 102 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 Y_RNA.154-201ENST00000363624 102 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 Y_RNA.302-201ENST00000364997 102 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 RNY3P1-201ENST00000365085 102 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 RNY3-201ENST00000365484 102 ntBASIC6.07□□□□□ -1.44
ATG4DQ86TL0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4DQ86TL0 Y_RNA.490-201ENST00000384413 102 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms