Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 RN7SL170P-201ENST00000487098 295 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AC083829.1-201ENST00000503756 657 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AC092349.1-201ENST00000504903 310 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 UGT2A3P7-201ENST00000510485 734 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 Y_RNA.719-201ENST00000517156 106 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 RMST_9.1-201ENST00000619945 193 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 MIR8080-201ENST00000622224 89 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AC015908.5-201ENST00000623289 343 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 SMG1P6-201ENST00000532337 2930 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AC011266.1-201ENST00000624119 3569 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AC093909.5-201ENST00000621839 1799 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AL512422.1-201ENST00000407033 553 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 EI24P4-201ENST00000423683 1078 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AC092162.1-201ENST00000432828 434 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 DNAJA1P5-201ENST00000440278 943 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 RPS26P2-201ENST00000440331 348 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AL691482.1-201ENST00000453255 87 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AC239798.3-201ENST00000454459 408 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 RANP1-206ENST00000455094 651 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 RNU6-941P-201ENST00000516346 108 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 TOMM20P1-201ENST00000534518 427 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 ELOCP28-201ENST00000590044 317 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 FO393422.1-201ENST00000603908 708 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AC007390.2-201ENST00000606229 3803 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AC055839.1-201ENST00000634467 498 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 ASNSP1-201ENST00000518311 1939 ntBASIC4.42□□□□□ -1.7
CCDC58Q4VC31 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC58Q4VC31 AC245100.2-201ENST00000454544 1679 ntBASIC4.41□□□□□ -1.7
CCDC58Q4VC31 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.41□□□□□ -1.7
CCDC58Q4VC31 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC58Q4VC31 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC58Q4VC31 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC58Q4VC31 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC58Q4VC31 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CCDC58Q4VC31 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC58Q4VC31 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC58Q4VC31 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CCDC58Q4VC31 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC58Q4VC31 AL353625.1-202ENST00000366273 571 ntBASIC4.41□□□□□ -1.7
CCDC58Q4VC31 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC58Q4VC31 RNU6-729P-201ENST00000384399 107 ntBASIC4.41□□□□□ -1.7
CCDC58Q4VC31 MIR600-201ENST00000385007 98 ntBASIC4.41□□□□□ -1.7
CCDC58Q4VC31 RNA5SP372-201ENST00000390836 115 ntBASIC4.41□□□□□ -1.7
CCDC58Q4VC31 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC58Q4VC31 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CCDC58Q4VC31 ATP5HP3-201ENST00000396994 486 ntBASIC4.41□□□□□ -1.7
CCDC58Q4VC31 AL390774.1-201ENST00000411924 246 ntBASIC4.41□□□□□ -1.7
CCDC58Q4VC31 SEPT7P8-201ENST00000413308 775 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms