Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 MTND3P12-201ENST00000559068 328 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 MTND3P13-201ENST00000574391 343 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 MIR4489-201ENST00000578869 62 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AC025857.2-201ENST00000602711 238 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 GAS5-AS1-201ENST00000602767 694 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AL360012.1-201ENST00000602813 131 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AC025811.1-201ENST00000604312 472 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AL583856.2-201ENST00000606298 543 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AC016877.3-201ENST00000606778 504 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AC023509.5-201ENST00000617434 807 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AC013470.4-201ENST00000619978 986 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 ZNF663P-202ENST00000641770 1131 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 LINC02211-204ENST00000642024 1070 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AC138393.1-206ENST00000540997 1886 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 AL355488.2-201ENST00000609909 2850 ntBASIC6.83□□□□□ -1.32
CCDC144BQ3MJ40 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AL022323.4-201ENST00000623980 13120 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 RNF6P1-201ENST00000444889 1784 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 MIR375-201ENST00000362103 64 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 SNRPEP6-201ENST00000407465 277 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 KRR1P1-201ENST00000419430 803 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AC093155.2-201ENST00000420734 937 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 C1DP1-201ENST00000426049 402 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 HIGD1AP4-201ENST00000430194 280 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AC234064.1-201ENST00000436312 247 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 Z77249.1-201ENST00000444622 1175 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 DNAJC19P8-201ENST00000452887 259 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 RPL21P6-201ENST00000479171 504 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 ST13P12-201ENST00000508958 1094 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 ATP5LP3-201ENST00000514223 304 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 RNA5SP362-201ENST00000516048 118 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 CYCSP22-201ENST00000517555 339 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AP000859.1-201ENST00000525536 307 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 UBTFL10-201ENST00000528532 562 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 OR6M2P-201ENST00000529831 871 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AC022404.1-201ENST00000555320 273 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AC006530.1-201ENST00000555980 571 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AC007225.2-201ENST00000562529 256 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 RNU4ATAC-201ENST00000580972 127 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AC092608.3-201ENST00000625017 386 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AC136428.4-201ENST00000634254 1155 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 MIR193BHG-214ENST00000641765 509 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AP000432.2-201ENST00000624164 2048 ntBASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
CCDC144BQ3MJ40 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AC093775.1-201ENST00000624154 1868 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 U3.10-201ENST00000364459 214 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 AL391361.1-201ENST00000405580 489 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 RNU6-77P-201ENST00000410554 91 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 BRWD1P3-201ENST00000428816 390 ntBASIC6.81□□□□□ -1.32
CCDC144BQ3MJ40 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms