Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RN7SKP124-201ENST00000364730 341 ntBASIC4.35□□□□□ -1.71
ACTBP60709 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.35□□□□□ -1.71
ACTBP60709 AL589994.1-201ENST00000404962 340 ntBASIC4.35□□□□□ -1.71
ACTBP60709 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.35□□□□□ -1.71
ACTBP60709 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.35□□□□□ -1.71
ACTBP60709 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.35□□□□□ -1.71
ACTBP60709 AP000281.1-201ENST00000444036 316 ntBASIC4.35□□□□□ -1.71
ACTBP60709 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.35□□□□□ -1.71
ACTBP60709 RN7SL717P-201ENST00000478343 297 ntBASIC4.35□□□□□ -1.71
ACTBP60709 RN7SL466P-201ENST00000497546 295 ntBASIC4.35□□□□□ -1.71
ACTBP60709 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.35□□□□□ -1.71
ACTBP60709 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.35□□□□□ -1.71
ACTBP60709 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.35□□□□□ -1.71
ACTBP60709 AL512310.9-201ENST00000553311 948 ntBASIC4.35□□□□□ -1.71
ACTBP60709 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.35□□□□□ -1.71
ACTBP60709 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ACTBP60709 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.35□□□□□ -1.71
ACTBP60709 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.35□□□□□ -1.71
ACTBP60709 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.35□□□□□ -1.71
ACTBP60709 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.35□□□□□ -1.71
ACTBP60709 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ACTBP60709 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
ACTBP60709 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.35□□□□□ -1.71
ACTBP60709 AL133268.1-201ENST00000405676 1401 ntBASIC4.35□□□□□ -1.71
ACTBP60709 CASC19-206ENST00000641028 1430 ntBASIC4.35□□□□□ -1.71
ACTBP60709 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.35□□□□□ -1.71
ACTBP60709 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ACTBP60709 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ACTBP60709 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
ACTBP60709 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.34□□□□□ -1.71
ACTBP60709 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ACTBP60709 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ACTBP60709 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ACTBP60709 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
ACTBP60709 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
ACTBP60709 DHX9P1-201ENST00000436565 3076 ntBASIC4.34□□□□□ -1.71
ACTBP60709 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ACTBP60709 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
ACTBP60709 MIR323A-201ENST00000362199 86 ntBASIC4.34□□□□□ -1.71
ACTBP60709 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.34□□□□□ -1.71
ACTBP60709 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ACTBP60709 SNORA16A-201ENST00000384342 137 ntBASIC4.34□□□□□ -1.71
ACTBP60709 AC092642.1-201ENST00000392417 425 ntBASIC4.34□□□□□ -1.71
ACTBP60709 HSPD1P16-201ENST00000402302 394 ntBASIC4.34□□□□□ -1.71
ACTBP60709 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ACTBP60709 SLC35E1P1-201ENST00000419313 864 ntBASIC4.34□□□□□ -1.71
ACTBP60709 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.34□□□□□ -1.71
ACTBP60709 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.34□□□□□ -1.71
ACTBP60709 CKS1BP6-201ENST00000424932 240 ntBASIC4.34□□□□□ -1.71
ACTBP60709 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.34□□□□□ -1.71
ACTBP60709 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.34□□□□□ -1.71
ACTBP60709 AC012075.1-201ENST00000436549 580 ntBASIC4.34□□□□□ -1.71
ACTBP60709 AP000936.3-201ENST00000438127 255 ntBASIC4.34□□□□□ -1.71
ACTBP60709 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.34□□□□□ -1.71
ACTBP60709 AL162388.1-201ENST00000450912 352 ntBASIC4.34□□□□□ -1.71
ACTBP60709 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.34□□□□□ -1.71
ACTBP60709 AC104634.1-201ENST00000452720 462 ntBASIC4.34□□□□□ -1.71
ACTBP60709 RANP1-206ENST00000455094 651 ntBASIC4.34□□□□□ -1.71
ACTBP60709 SETP20-201ENST00000457046 852 ntBASIC4.34□□□□□ -1.71
ACTBP60709 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.34□□□□□ -1.71
ACTBP60709 AC108751.2-201ENST00000469993 231 ntBASIC4.34□□□□□ -1.71
ACTBP60709 AC100832.1-201ENST00000471945 383 ntBASIC4.34□□□□□ -1.71
ACTBP60709 RPL7P51-201ENST00000490532 749 ntBASIC4.34□□□□□ -1.71
ACTBP60709 AC104109.1-201ENST00000498563 436 ntBASIC4.34□□□□□ -1.71
ACTBP60709 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.34□□□□□ -1.71
ACTBP60709 TCP11X3P-202ENST00000514289 1254 ntBASIC4.34□□□□□ -1.71
ACTBP60709 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
ACTBP60709 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.34□□□□□ -1.71
ACTBP60709 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.34□□□□□ -1.71
ACTBP60709 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.34□□□□□ -1.71
ACTBP60709 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.34□□□□□ -1.71
ACTBP60709 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.34□□□□□ -1.71
ACTBP60709 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.34□□□□□ -1.71
ACTBP60709 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.34□□□□□ -1.71
ACTBP60709 AC007066.2-202ENST00000566531 914 ntBASIC4.34□□□□□ -1.71
ACTBP60709 AC087283.1-201ENST00000604029 1074 ntBASIC4.34□□□□□ -1.71
ACTBP60709 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.34□□□□□ -1.71
ACTBP60709 AC010245.2-201ENST00000606908 1167 ntBASIC4.34□□□□□ -1.71
ACTBP60709 AC004477.3-201ENST00000614061 590 ntBASIC4.34□□□□□ -1.71
ACTBP60709 MIR8080-201ENST00000622224 89 ntBASIC4.34□□□□□ -1.71
ACTBP60709 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ACTBP60709 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.34□□□□□ -1.71
ACTBP60709 PHKBP1-201ENST00000450951 1951 ntBASIC4.34□□□□□ -1.71
ACTBP60709 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ACTBP60709 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
ACTBP60709 SALL4P2-201ENST00000423288 2910 ntBASIC4.34□□□□□ -1.72
ACTBP60709 AP001273.1-201ENST00000624493 3152 ntBASIC4.34□□□□□ -1.72
ACTBP60709 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ACTBP60709 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
ACTBP60709 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.33□□□□□ -1.72
ACTBP60709 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ACTBP60709 AL445437.1-201ENST00000623157 3087 ntBASIC4.33□□□□□ -1.72
ACTBP60709 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.33□□□□□ -1.72
ACTBP60709 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
ACTBP60709 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
ACTBP60709 AL121950.1-201ENST00000624993 2077 ntBASIC4.33□□□□□ -1.72
ACTBP60709 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
ACTBP60709 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
ACTBP60709 AC074029.4-201ENST00000624796 1859 ntBASIC4.33□□□□□ -1.72
ACTBP60709 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms