Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LIM2P55344 AC117434.1-201ENST00000419971 836 ntBASIC4.68□□□□□ -1.66
LIM2P55344 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.68□□□□□ -1.66
LIM2P55344 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.68□□□□□ -1.66
LIM2P55344 SCAND3P1-201ENST00000439854 1060 ntBASIC4.68□□□□□ -1.66
LIM2P55344 AC073052.1-201ENST00000440417 714 ntBASIC4.68□□□□□ -1.66
LIM2P55344 TRY2P-201ENST00000448860 689 ntBASIC4.68□□□□□ -1.66
LIM2P55344 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.68□□□□□ -1.66
LIM2P55344 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.68□□□□□ -1.66
LIM2P55344 snoU13.20-201ENST00000459180 104 ntBASIC4.68□□□□□ -1.66
LIM2P55344 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.68□□□□□ -1.66
LIM2P55344 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.68□□□□□ -1.66
LIM2P55344 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.68□□□□□ -1.66
LIM2P55344 OR52A4P-203ENST00000498233 1014 ntBASIC4.68□□□□□ -1.66
LIM2P55344 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.68□□□□□ -1.66
LIM2P55344 MRPS33P2-201ENST00000507850 322 ntBASIC4.68□□□□□ -1.66
LIM2P55344 HMGB3P16-201ENST00000508037 287 ntBASIC4.68□□□□□ -1.66
LIM2P55344 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LIM2P55344 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.68□□□□□ -1.66
LIM2P55344 RFPL4AP3-201ENST00000515267 345 ntBASIC4.68□□□□□ -1.66
LIM2P55344 AP002981.1-201ENST00000517692 975 ntBASIC4.68□□□□□ -1.66
LIM2P55344 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.68□□□□□ -1.66
LIM2P55344 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LIM2P55344 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.68□□□□□ -1.66
LIM2P55344 AC104687.2-201ENST00000604442 342 ntBASIC4.68□□□□□ -1.66
LIM2P55344 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.68□□□□□ -1.66
LIM2P55344 AC019206.1-201ENST00000621938 425 ntBASIC4.68□□□□□ -1.66
LIM2P55344 AC091905.4-201ENST00000623432 202 ntBASIC4.68□□□□□ -1.66
LIM2P55344 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.68□□□□□ -1.66
LIM2P55344 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LIM2P55344 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.68□□□□□ -1.66
LIM2P55344 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.68□□□□□ -1.66
LIM2P55344 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.68□□□□□ -1.66
LIM2P55344 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LIM2P55344 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.68□□□□□ -1.66
LIM2P55344 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LIM2P55344 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LIM2P55344 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIM2P55344 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LIM2P55344 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
LIM2P55344 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LIM2P55344 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LIM2P55344 RN7SKP104-201ENST00000362605 328 ntBASIC4.67□□□□□ -1.66
LIM2P55344 RNA5SP123-201ENST00000363244 119 ntBASIC4.67□□□□□ -1.66
LIM2P55344 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LIM2P55344 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIM2P55344 AL589647.1-201ENST00000402485 466 ntBASIC4.67□□□□□ -1.66
LIM2P55344 AC244453.4-201ENST00000419150 388 ntBASIC4.67□□□□□ -1.66
LIM2P55344 PSMD10P3-201ENST00000437000 448 ntBASIC4.67□□□□□ -1.66
LIM2P55344 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.67□□□□□ -1.66
LIM2P55344 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.67□□□□□ -1.66
LIM2P55344 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LIM2P55344 MTND3P6-201ENST00000485242 339 ntBASIC4.67□□□□□ -1.66
LIM2P55344 RN7SL97P-201ENST00000486780 299 ntBASIC4.67□□□□□ -1.66
LIM2P55344 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.67□□□□□ -1.66
LIM2P55344 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.67□□□□□ -1.66
LIM2P55344 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.67□□□□□ -1.66
LIM2P55344 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.67□□□□□ -1.66
LIM2P55344 OR8A2P-201ENST00000528631 952 ntBASIC4.67□□□□□ -1.66
LIM2P55344 AC005868.1-201ENST00000536421 331 ntBASIC4.67□□□□□ -1.66
LIM2P55344 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LIM2P55344 BNIP3P1-201ENST00000547295 580 ntBASIC4.67□□□□□ -1.66
LIM2P55344 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LIM2P55344 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.67□□□□□ -1.66
LIM2P55344 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.67□□□□□ -1.66
LIM2P55344 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.67□□□□□ -1.66
LIM2P55344 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.67□□□□□ -1.66
LIM2P55344 AC112694.2-201ENST00000623697 768 ntBASIC4.67□□□□□ -1.66
LIM2P55344 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
LIM2P55344 AP000550.3-201ENST00000637734 379 ntBASIC4.67□□□□□ -1.66
LIM2P55344 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.67□□□□□ -1.66
LIM2P55344 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
LIM2P55344 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.67□□□□□ -1.66
LIM2P55344 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIM2P55344 PROS2P-201ENST00000474651 1951 ntBASIC4.67□□□□□ -1.66
LIM2P55344 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIM2P55344 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LIM2P55344 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LIM2P55344 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.66□□□□□ -1.66
LIM2P55344 AL031595.2-201ENST00000624215 19071 ntBASIC4.66□□□□□ -1.66
LIM2P55344 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LIM2P55344 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LIM2P55344 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.66□□□□□ -1.66
LIM2P55344 INTS6P1-201ENST00000504674 2530 ntBASIC4.66□□□□□ -1.66
LIM2P55344 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LIM2P55344 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LIM2P55344 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LIM2P55344 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LIM2P55344 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LIM2P55344 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.66□□□□□ -1.66
LIM2P55344 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.66□□□□□ -1.66
LIM2P55344 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.66□□□□□ -1.66
LIM2P55344 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LIM2P55344 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.66□□□□□ -1.66
LIM2P55344 RAB9AP4-201ENST00000415230 609 ntBASIC4.66□□□□□ -1.66
LIM2P55344 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.66□□□□□ -1.66
LIM2P55344 CHEK2P3-201ENST00000416118 248 ntBASIC4.66□□□□□ -1.66
LIM2P55344 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.66□□□□□ -1.66
LIM2P55344 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.66□□□□□ -1.66
LIM2P55344 RPL7P11-201ENST00000437586 658 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms