Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.09□□□□□ -1.59
CDH13P55290 MIR4675-201ENST00000577898 77 ntBASIC5.09□□□□□ -1.59
CDH13P55290 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH13P55290 CBX3P2-202ENST00000583365 535 ntBASIC5.09□□□□□ -1.59
CDH13P55290 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH13P55290 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.09□□□□□ -1.59
CDH13P55290 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH13P55290 AL445493.3-201ENST00000619568 477 ntBASIC5.09□□□□□ -1.59
CDH13P55290 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH13P55290 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH13P55290 THAP12P5-201ENST00000405864 2275 ntBASIC5.09□□□□□ -1.59
CDH13P55290 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH13P55290 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDH13P55290 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDH13P55290 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CDH13P55290 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH13P55290 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CDH13P55290 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDH13P55290 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH13P55290 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH13P55290 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH13P55290 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH13P55290 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH13P55290 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH13P55290 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH13P55290 RN7SKP124-201ENST00000364730 341 ntBASIC5.08□□□□□ -1.6
CDH13P55290 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH13P55290 TAF9BP2-201ENST00000400856 499 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH13P55290 MARK2P12-201ENST00000420129 585 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AC002069.1-201ENST00000429649 1159 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH13P55290 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH13P55290 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH13P55290 SCAND3P1-201ENST00000439854 1060 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH13P55290 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH13P55290 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH13P55290 PSMC1P13-201ENST00000458195 985 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AC100832.1-201ENST00000471945 383 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH13P55290 NPM1P17-201ENST00000479221 602 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AC116562.1-201ENST00000485355 781 ntBASIC5.08□□□□□ -1.6
CDH13P55290 RPEP1-201ENST00000504507 658 ntBASIC5.08□□□□□ -1.6
CDH13P55290 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH13P55290 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH13P55290 RNU6-941P-201ENST00000516346 108 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH13P55290 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AC093014.1-201ENST00000548926 724 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH13P55290 AC006349.1-201ENST00000555526 235 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.08□□□□□ -1.6
CDH13P55290 MIR3908-201ENST00000579798 126 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH13P55290 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH13P55290 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH13P55290 ZNF92P2-201ENST00000600543 1059 ntBASIC5.08□□□□□ -1.6
CDH13P55290 RNA5SP440-201ENST00000612665 119 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH13P55290 AC127024.6-201ENST00000621598 424 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AL691477.1-201ENST00000624398 162 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AP002371.2-201ENST00000624450 503 ntBASIC5.08□□□□□ -1.6
CDH13P55290 AC080188.3-201ENST00000624842 748 ntBASIC5.08□□□□□ -1.6
CDH13P55290 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CDH13P55290 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
CDH13P55290 AC025574.1-201ENST00000554784 1653 ntBASIC5.08□□□□□ -1.6
CDH13P55290 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH13P55290 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH13P55290 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CDH13P55290 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH13P55290 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.07□□□□□ -1.6
CDH13P55290 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH13P55290 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH13P55290 RNU6-609P-201ENST00000365459 107 ntBASIC5.07□□□□□ -1.6
CDH13P55290 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDH13P55290 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH13P55290 AL034374.1-201ENST00000406329 351 ntBASIC5.07□□□□□ -1.6
CDH13P55290 AC211486.3-201ENST00000412694 621 ntBASIC5.07□□□□□ -1.6
CDH13P55290 NPM1P40-201ENST00000412758 733 ntBASIC5.07□□□□□ -1.6
CDH13P55290 AL121882.1-201ENST00000422893 417 ntBASIC5.07□□□□□ -1.6
CDH13P55290 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH13P55290 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH13P55290 AP000949.1-201ENST00000438328 629 ntBASIC5.07□□□□□ -1.6
CDH13P55290 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH13P55290 ELOCP3-201ENST00000439303 348 ntBASIC5.07□□□□□ -1.6
CDH13P55290 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH13P55290 PCNPP2-201ENST00000441651 455 ntBASIC5.07□□□□□ -1.6
CDH13P55290 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH13P55290 AL161636.2-201ENST00000445179 927 ntBASIC5.07□□□□□ -1.6
CDH13P55290 RPL31P15-201ENST00000449770 338 ntBASIC5.07□□□□□ -1.6
CDH13P55290 RPL7P45-201ENST00000455851 743 ntBASIC5.07□□□□□ -1.6
CDH13P55290 EIF1P7-201ENST00000487533 337 ntBASIC5.07□□□□□ -1.6
CDH13P55290 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH13P55290 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH13P55290 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH13P55290 MTND1P36-201ENST00000522384 936 ntBASIC5.07□□□□□ -1.6
CDH13P55290 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CDH13P55290 AC004923.2-201ENST00000529649 369 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms