Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP98P52948 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
NUP98P52948 ZNF137P-201ENST00000456718 1920 ntBASIC5.87□□□□□ -1.47
NUP98P52948 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NUP98P52948 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
NUP98P52948 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NUP98P52948 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NUP98P52948 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NUP98P52948 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
NUP98P52948 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.87□□□□□ -1.47
NUP98P52948 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP98P52948 RPL23AP24-201ENST00000458203 385 ntBASIC5.87□□□□□ -1.47
NUP98P52948 AC108751.3-201ENST00000461814 1020 ntBASIC5.87□□□□□ -1.47
NUP98P52948 AC015795.1-201ENST00000513669 327 ntBASIC5.87□□□□□ -1.47
NUP98P52948 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NUP98P52948 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NUP98P52948 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.87□□□□□ -1.47
NUP98P52948 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.87□□□□□ -1.47
NUP98P52948 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP98P52948 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
NUP98P52948 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
NUP98P52948 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP98P52948 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP98P52948 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP98P52948 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP98P52948 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NUP98P52948 RNU4-39P-201ENST00000362455 127 ntBASIC5.86□□□□□ -1.47
NUP98P52948 RNU1-130P-201ENST00000363930 160 ntBASIC5.86□□□□□ -1.47
NUP98P52948 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP98P52948 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP98P52948 RPL23AP93-201ENST00000440847 484 ntBASIC5.86□□□□□ -1.47
NUP98P52948 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.86□□□□□ -1.47
NUP98P52948 KPNA2P3-201ENST00000584190 848 ntBASIC5.86□□□□□ -1.47
NUP98P52948 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP98P52948 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP98P52948 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP98P52948 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP98P52948 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP98P52948 SALL4P2-201ENST00000423288 2910 ntBASIC5.86□□□□□ -1.47
NUP98P52948 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP98P52948 STX3-208ENST00000641815 3236 ntBASIC5.86□□□□□ -1.47
NUP98P52948 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP98P52948 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
NUP98P52948 VN2R3P-201ENST00000422626 1412 ntBASIC5.86□□□□□ -1.47
NUP98P52948 AC090017.1-201ENST00000548612 1779 ntBASIC5.86□□□□□ -1.47
NUP98P52948 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
NUP98P52948 AC093671.1-201ENST00000624981 2929 ntBASIC5.86□□□□□ -1.47
NUP98P52948 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
NUP98P52948 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP98P52948 AC008033.1-201ENST00000216407 1162 ntBASIC5.85□□□□□ -1.47
NUP98P52948 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NUP98P52948 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP98P52948 PCNPP4-201ENST00000414817 517 ntBASIC5.85□□□□□ -1.47
NUP98P52948 AC013429.2-201ENST00000418798 781 ntBASIC5.85□□□□□ -1.47
NUP98P52948 CKS1BP6-201ENST00000424932 240 ntBASIC5.85□□□□□ -1.47
NUP98P52948 RPL5P2-201ENST00000429598 854 ntBASIC5.85□□□□□ -1.47
NUP98P52948 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP98P52948 AC092162.1-201ENST00000432828 434 ntBASIC5.85□□□□□ -1.47
NUP98P52948 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP98P52948 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.85□□□□□ -1.47
NUP98P52948 AC103987.1-201ENST00000473394 348 ntBASIC5.85□□□□□ -1.47
NUP98P52948 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP98P52948 MIR6830-201ENST00000636015 70 ntBASIC5.85□□□□□ -1.47
NUP98P52948 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP98P52948 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP98P52948 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP98P52948 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP98P52948 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP98P52948 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP98P52948 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
NUP98P52948 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP98P52948 RNA5SP509-201ENST00000364577 119 ntBASIC5.85□□□□□ -1.47
NUP98P52948 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP98P52948 AL356387.2-201ENST00000422272 243 ntBASIC5.85□□□□□ -1.47
NUP98P52948 RPL7AP25-201ENST00000423357 805 ntBASIC5.85□□□□□ -1.47
NUP98P52948 AP001324.1-201ENST00000428553 399 ntBASIC5.85□□□□□ -1.47
NUP98P52948 RN7SL41P-201ENST00000476144 297 ntBASIC5.85□□□□□ -1.47
NUP98P52948 AL049874.2-201ENST00000492636 288 ntBASIC5.85□□□□□ -1.47
NUP98P52948 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP98P52948 Y_RNA.719-201ENST00000517156 106 ntBASIC5.85□□□□□ -1.47
NUP98P52948 IGLVIV-65-201ENST00000517313 360 ntBASIC5.85□□□□□ -1.47
NUP98P52948 AC005868.1-201ENST00000536421 331 ntBASIC5.85□□□□□ -1.47
NUP98P52948 AC006349.1-201ENST00000555526 235 ntBASIC5.85□□□□□ -1.47
NUP98P52948 PARP1P2-201ENST00000556806 195 ntBASIC5.85□□□□□ -1.47
NUP98P52948 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.85□□□□□ -1.47
NUP98P52948 AC027216.1-201ENST00000577726 685 ntBASIC5.85□□□□□ -1.47
NUP98P52948 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP98P52948 OR7A19P-201ENST00000608051 733 ntBASIC5.85□□□□□ -1.47
NUP98P52948 AP003497.2-201ENST00000624220 967 ntBASIC5.85□□□□□ -1.47
NUP98P52948 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP98P52948 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP98P52948 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP98P52948 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP98P52948 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NUP98P52948 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NUP98P52948 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.84□□□□□ -1.47
NUP98P52948 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NUP98P52948 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NUP98P52948 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NUP98P52948 AL450345.1-202ENST00000605741 3881 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms