Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GPC3P51654 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC3P51654 RN7SKP113-201ENST00000363891 295 ntBASIC5.6□□□□□ -1.51
GPC3P51654 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.6□□□□□ -1.51
GPC3P51654 COX6B1P1-201ENST00000415962 213 ntBASIC5.6□□□□□ -1.51
GPC3P51654 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.6□□□□□ -1.51
GPC3P51654 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC3P51654 RN7SL443P-201ENST00000464331 290 ntBASIC5.6□□□□□ -1.51
GPC3P51654 RPL7P16-201ENST00000479738 738 ntBASIC5.6□□□□□ -1.51
GPC3P51654 AC090142.2-201ENST00000483263 416 ntBASIC5.6□□□□□ -1.51
GPC3P51654 COX6B1P2-201ENST00000489624 230 ntBASIC5.6□□□□□ -1.51
GPC3P51654 AC140172.1-201ENST00000502928 141 ntBASIC5.6□□□□□ -1.51
GPC3P51654 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC3P51654 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.6□□□□□ -1.51
GPC3P51654 AC100784.1-201ENST00000522790 310 ntBASIC5.6□□□□□ -1.51
GPC3P51654 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.6□□□□□ -1.51
GPC3P51654 AL390334.1-201ENST00000556395 450 ntBASIC5.6□□□□□ -1.51
GPC3P51654 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC3P51654 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC3P51654 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.6□□□□□ -1.51
GPC3P51654 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.6□□□□□ -1.51
GPC3P51654 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.6□□□□□ -1.51
GPC3P51654 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.6□□□□□ -1.51
GPC3P51654 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC3P51654 AC005229.3-201ENST00000603438 323 ntBASIC5.6□□□□□ -1.51
GPC3P51654 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.6□□□□□ -1.51
GPC3P51654 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.6□□□□□ -1.51
GPC3P51654 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.6□□□□□ -1.51
GPC3P51654 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC3P51654 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC3P51654 IRF5P1-201ENST00000504852 2164 ntBASIC5.6□□□□□ -1.51
GPC3P51654 AC027228.2-201ENST00000567141 2154 ntBASIC5.6□□□□□ -1.51
GPC3P51654 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GPC3P51654 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC3P51654 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC3P51654 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
GPC3P51654 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GPC3P51654 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
GPC3P51654 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GPC3P51654 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
GPC3P51654 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
GPC3P51654 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.59□□□□□ -1.51
GPC3P51654 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC3P51654 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
GPC3P51654 MT-RNR1-201ENST00000389680 954 ntBASIC5.59□□□□□ -1.51
GPC3P51654 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
GPC3P51654 RNA5SP105-201ENST00000391123 113 ntBASIC5.59□□□□□ -1.51
GPC3P51654 AC104297.1-201ENST00000393779 870 ntBASIC5.59□□□□□ -1.51
GPC3P51654 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC3P51654 AL360081.1-201ENST00000428299 555 ntBASIC5.59□□□□□ -1.51
GPC3P51654 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC3P51654 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC3P51654 AL049745.1-201ENST00000433953 286 ntBASIC5.59□□□□□ -1.51
GPC3P51654 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC3P51654 AC073648.4-201ENST00000442655 781 ntBASIC5.59□□□□□ -1.51
GPC3P51654 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC3P51654 AL354714.3-201ENST00000447284 493 ntBASIC5.59□□□□□ -1.51
GPC3P51654 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC3P51654 AC092324.1-201ENST00000468671 324 ntBASIC5.59□□□□□ -1.51
GPC3P51654 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC3P51654 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.59□□□□□ -1.51
GPC3P51654 AC010350.1-201ENST00000504908 231 ntBASIC5.59□□□□□ -1.51
GPC3P51654 BTF3P13-201ENST00000513224 490 ntBASIC5.59□□□□□ -1.51
GPC3P51654 RNA5SP230-201ENST00000517039 122 ntBASIC5.59□□□□□ -1.51
GPC3P51654 CDH12P4-201ENST00000517835 295 ntBASIC5.59□□□□□ -1.51
GPC3P51654 CDH12P3-201ENST00000517935 295 ntBASIC5.59□□□□□ -1.51
GPC3P51654 CDH12P1-201ENST00000518435 295 ntBASIC5.59□□□□□ -1.51
GPC3P51654 AC021006.3-201ENST00000530771 192 ntBASIC5.59□□□□□ -1.51
GPC3P51654 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC3P51654 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC3P51654 NMNAT1P1-201ENST00000554095 876 ntBASIC5.59□□□□□ -1.51
GPC3P51654 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
GPC3P51654 AL136295.6-201ENST00000610486 658 ntBASIC5.59□□□□□ -1.51
GPC3P51654 NF1P10-201ENST00000613227 742 ntBASIC5.59□□□□□ -1.51
GPC3P51654 AC108359.1-201ENST00000616451 1211 ntBASIC5.59□□□□□ -1.51
GPC3P51654 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC3P51654 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC3P51654 AC112198.2-201ENST00000426589 6996 ntBASIC5.59□□□□□ -1.51
GPC3P51654 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
GPC3P51654 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
GPC3P51654 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
GPC3P51654 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.59□□□□□ -1.52
GPC3P51654 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
GPC3P51654 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GPC3P51654 RBPJP2-201ENST00000618187 1444 ntBASIC5.58□□□□□ -1.52
GPC3P51654 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.58□□□□□ -1.52
GPC3P51654 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
GPC3P51654 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.58□□□□□ -1.52
GPC3P51654 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GPC3P51654 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
GPC3P51654 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GPC3P51654 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.58□□□□□ -1.52
GPC3P51654 RN7SKP149-201ENST00000363008 344 ntBASIC5.58□□□□□ -1.52
GPC3P51654 SNORA2.3-201ENST00000383920 135 ntBASIC5.58□□□□□ -1.52
GPC3P51654 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
GPC3P51654 AL035419.1-201ENST00000397037 564 ntBASIC5.58□□□□□ -1.52
GPC3P51654 AP002530.1-201ENST00000405705 684 ntBASIC5.58□□□□□ -1.52
GPC3P51654 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.58□□□□□ -1.52
GPC3P51654 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.58□□□□□ -1.52
GPC3P51654 HSPE1P16-201ENST00000426640 348 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms