Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.35□□□□□ -1.55
LHX1P48742 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.35□□□□□ -1.55
LHX1P48742 AC008147.3-201ENST00000548666 354 ntBASIC5.35□□□□□ -1.55
LHX1P48742 AC012414.2-201ENST00000559474 187 ntBASIC5.35□□□□□ -1.55
LHX1P48742 PRPF19P1-201ENST00000584766 898 ntBASIC5.35□□□□□ -1.55
LHX1P48742 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.35□□□□□ -1.55
LHX1P48742 AC012213.4-201ENST00000606457 354 ntBASIC5.35□□□□□ -1.55
LHX1P48742 AP001521.2-201ENST00000608772 546 ntBASIC5.35□□□□□ -1.55
LHX1P48742 AL049539.1-201ENST00000611964 459 ntBASIC5.35□□□□□ -1.55
LHX1P48742 AC015922.4-201ENST00000612568 690 ntBASIC5.35□□□□□ -1.55
LHX1P48742 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.35□□□□□ -1.55
LHX1P48742 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.35□□□□□ -1.55
LHX1P48742 AP005435.3-201ENST00000531260 3198 ntBASIC5.35□□□□□ -1.55
LHX1P48742 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.35□□□□□ -1.55
LHX1P48742 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LHX1P48742 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LHX1P48742 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
LHX1P48742 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
LHX1P48742 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LHX1P48742 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
LHX1P48742 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LHX1P48742 MTND5P23-201ENST00000430812 1655 ntBASIC5.34□□□□□ -1.55
LHX1P48742 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LHX1P48742 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.34□□□□□ -1.55
LHX1P48742 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.34□□□□□ -1.55
LHX1P48742 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LHX1P48742 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LHX1P48742 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LHX1P48742 COX5BP7-201ENST00000414780 274 ntBASIC5.34□□□□□ -1.55
LHX1P48742 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.34□□□□□ -1.55
LHX1P48742 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.34□□□□□ -1.55
LHX1P48742 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.34□□□□□ -1.55
LHX1P48742 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.34□□□□□ -1.55
LHX1P48742 RPL31P44-201ENST00000447680 377 ntBASIC5.34□□□□□ -1.55
LHX1P48742 PRPF38AP1-201ENST00000451976 933 ntBASIC5.34□□□□□ -1.55
LHX1P48742 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.34□□□□□ -1.55
LHX1P48742 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.34□□□□□ -1.55
LHX1P48742 RPL7P16-201ENST00000479738 738 ntBASIC5.34□□□□□ -1.55
LHX1P48742 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.34□□□□□ -1.55
LHX1P48742 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.34□□□□□ -1.55
LHX1P48742 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LHX1P48742 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.34□□□□□ -1.55
LHX1P48742 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.34□□□□□ -1.55
LHX1P48742 RNU6-760P-201ENST00000516078 97 ntBASIC5.34□□□□□ -1.55
LHX1P48742 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.34□□□□□ -1.55
LHX1P48742 MTND2P7-201ENST00000521337 640 ntBASIC5.34□□□□□ -1.55
LHX1P48742 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.34□□□□□ -1.55
LHX1P48742 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.34□□□□□ -1.55
LHX1P48742 AP003168.1-201ENST00000530091 307 ntBASIC5.34□□□□□ -1.55
LHX1P48742 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.34□□□□□ -1.55
LHX1P48742 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.34□□□□□ -1.55
LHX1P48742 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.34□□□□□ -1.55
LHX1P48742 MIR3934-201ENST00000579806 107 ntBASIC5.34□□□□□ -1.55
LHX1P48742 MIR4436B2-201ENST00000581415 91 ntBASIC5.34□□□□□ -1.55
LHX1P48742 MIR4436B1-201ENST00000583272 91 ntBASIC5.34□□□□□ -1.55
LHX1P48742 AC010487.1-201ENST00000594408 1172 ntBASIC5.34□□□□□ -1.55
LHX1P48742 AP002884.5-201ENST00000595053 1132 ntBASIC5.34□□□□□ -1.55
LHX1P48742 AC005377.1-201ENST00000605126 456 ntBASIC5.34□□□□□ -1.55
LHX1P48742 HMGB1P51-201ENST00000605166 638 ntBASIC5.34□□□□□ -1.55
LHX1P48742 AC024940.4-201ENST00000605507 246 ntBASIC5.34□□□□□ -1.55
LHX1P48742 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.34□□□□□ -1.55
LHX1P48742 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LHX1P48742 AL162233.1-201ENST00000620014 944 ntBASIC5.34□□□□□ -1.55
LHX1P48742 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LHX1P48742 AL445528.2-201ENST00000620582 470 ntBASIC5.34□□□□□ -1.55
LHX1P48742 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.34□□□□□ -1.55
LHX1P48742 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LHX1P48742 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LHX1P48742 AC245100.2-201ENST00000454544 1679 ntBASIC5.34□□□□□ -1.56
LHX1P48742 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
LHX1P48742 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.34□□□□□ -1.56
LHX1P48742 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LHX1P48742 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.34□□□□□ -1.56
LHX1P48742 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
LHX1P48742 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.33□□□□□ -1.56
LHX1P48742 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LHX1P48742 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX1P48742 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LHX1P48742 AL450345.1-202ENST00000605741 3881 ntBASIC5.33□□□□□ -1.56
LHX1P48742 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX1P48742 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.33□□□□□ -1.56
LHX1P48742 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
LHX1P48742 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX1P48742 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX1P48742 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX1P48742 OR13C3-201ENST00000374781 1108 ntBASIC5.33□□□□□ -1.56
LHX1P48742 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX1P48742 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.33□□□□□ -1.56
LHX1P48742 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.33□□□□□ -1.56
LHX1P48742 AC079809.1-201ENST00000415468 276 ntBASIC5.33□□□□□ -1.56
LHX1P48742 COX6B1P1-201ENST00000415962 213 ntBASIC5.33□□□□□ -1.56
LHX1P48742 OR2AM1P-201ENST00000422137 422 ntBASIC5.33□□□□□ -1.56
LHX1P48742 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.33□□□□□ -1.56
LHX1P48742 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.33□□□□□ -1.56
LHX1P48742 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.33□□□□□ -1.56
LHX1P48742 AL138787.1-202ENST00000437804 898 ntBASIC5.33□□□□□ -1.56
LHX1P48742 PA2G4P6-201ENST00000438325 1197 ntBASIC5.33□□□□□ -1.56
LHX1P48742 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.33□□□□□ -1.56
LHX1P48742 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.33□□□□□ -1.56
LHX1P48742 TXNP5-201ENST00000441043 315 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms