Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNA5SP497-201ENST00000516081 97 ntBASIC5.45□□□□□ -1.54
SSR1P43307 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.45□□□□□ -1.54
SSR1P43307 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.45□□□□□ -1.54
SSR1P43307 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.45□□□□□ -1.54
SSR1P43307 RN7SL176P-201ENST00000580352 264 ntBASIC5.45□□□□□ -1.54
SSR1P43307 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.45□□□□□ -1.54
SSR1P43307 ELOCP28-201ENST00000590044 317 ntBASIC5.45□□□□□ -1.54
SSR1P43307 AL135786.2-201ENST00000608422 615 ntBASIC5.45□□□□□ -1.54
SSR1P43307 AC079395.2-201ENST00000610982 737 ntBASIC5.45□□□□□ -1.54
SSR1P43307 AL359513.1-201ENST00000614364 557 ntBASIC5.45□□□□□ -1.54
SSR1P43307 AC118658.2-201ENST00000618697 459 ntBASIC5.45□□□□□ -1.54
SSR1P43307 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.45□□□□□ -1.54
SSR1P43307 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.45□□□□□ -1.54
SSR1P43307 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.45□□□□□ -1.54
SSR1P43307 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.45□□□□□ -1.54
SSR1P43307 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SSR1P43307 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SSR1P43307 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SSR1P43307 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSR1P43307 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.45□□□□□ -1.54
SSR1P43307 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSR1P43307 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSR1P43307 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSR1P43307 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSR1P43307 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSR1P43307 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
SSR1P43307 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSR1P43307 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSR1P43307 RNA5SP90-201ENST00000364801 99 ntBASIC5.44□□□□□ -1.54
SSR1P43307 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSR1P43307 AL391422.1-201ENST00000402155 436 ntBASIC5.44□□□□□ -1.54
SSR1P43307 RNU2-50P-201ENST00000410494 143 ntBASIC5.44□□□□□ -1.54
SSR1P43307 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.44□□□□□ -1.54
SSR1P43307 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.44□□□□□ -1.54
SSR1P43307 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSR1P43307 AC046176.1-201ENST00000435260 1170 ntBASIC5.44□□□□□ -1.54
SSR1P43307 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.44□□□□□ -1.54
SSR1P43307 VN1R96P-201ENST00000446052 858 ntBASIC5.44□□□□□ -1.54
SSR1P43307 BX842559.2-201ENST00000451418 605 ntBASIC5.44□□□□□ -1.54
SSR1P43307 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.44□□□□□ -1.54
SSR1P43307 RPL23AP37-201ENST00000479658 549 ntBASIC5.44□□□□□ -1.54
SSR1P43307 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.44□□□□□ -1.54
SSR1P43307 HSPD1P11-201ENST00000508643 1702 ntBASIC5.44□□□□□ -1.54
SSR1P43307 TCP11X3P-202ENST00000514289 1254 ntBASIC5.44□□□□□ -1.54
SSR1P43307 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.44□□□□□ -1.54
SSR1P43307 AC138938.1-201ENST00000515431 782 ntBASIC5.44□□□□□ -1.54
SSR1P43307 RNA5SP362-201ENST00000516048 118 ntBASIC5.44□□□□□ -1.54
SSR1P43307 AC126177.5-201ENST00000549599 178 ntBASIC5.44□□□□□ -1.54
SSR1P43307 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSR1P43307 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.44□□□□□ -1.54
SSR1P43307 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.44□□□□□ -1.54
SSR1P43307 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SSR1P43307 AC008814.1-201ENST00000603797 406 ntBASIC5.44□□□□□ -1.54
SSR1P43307 AC007204.2-201ENST00000615022 616 ntBASIC5.44□□□□□ -1.54
SSR1P43307 AC067852.7-201ENST00000623270 535 ntBASIC5.44□□□□□ -1.54
SSR1P43307 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.44□□□□□ -1.54
SSR1P43307 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.44□□□□□ -1.54
SSR1P43307 AC007382.1-201ENST00000624376 2618 ntBASIC5.44□□□□□ -1.54
SSR1P43307 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSR1P43307 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSR1P43307 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
SSR1P43307 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.43□□□□□ -1.54
SSR1P43307 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.43□□□□□ -1.54
SSR1P43307 RNU6-167P-201ENST00000384292 106 ntBASIC5.43□□□□□ -1.54
SSR1P43307 SNORA67-201ENST00000384423 137 ntBASIC5.43□□□□□ -1.54
SSR1P43307 MIR600-201ENST00000385007 98 ntBASIC5.43□□□□□ -1.54
SSR1P43307 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SSR1P43307 AL158073.1-201ENST00000426848 1104 ntBASIC5.43□□□□□ -1.54
SSR1P43307 NANOGP4-201ENST00000427230 913 ntBASIC5.43□□□□□ -1.54
SSR1P43307 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.43□□□□□ -1.54
SSR1P43307 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.43□□□□□ -1.54
SSR1P43307 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.43□□□□□ -1.54
SSR1P43307 AL121877.1-201ENST00000453704 622 ntBASIC5.43□□□□□ -1.54
SSR1P43307 SIAH1P1-201ENST00000479411 923 ntBASIC5.43□□□□□ -1.54
SSR1P43307 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.43□□□□□ -1.54
SSR1P43307 VWA8P1-201ENST00000510889 176 ntBASIC5.43□□□□□ -1.54
SSR1P43307 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.43□□□□□ -1.54
SSR1P43307 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.43□□□□□ -1.54
SSR1P43307 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.43□□□□□ -1.54
SSR1P43307 EIF4EP5-201ENST00000528228 640 ntBASIC5.43□□□□□ -1.54
SSR1P43307 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.43□□□□□ -1.54
SSR1P43307 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.43□□□□□ -1.54
SSR1P43307 AC020978.7-201ENST00000575953 1187 ntBASIC5.43□□□□□ -1.54
SSR1P43307 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.43□□□□□ -1.54
SSR1P43307 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.43□□□□□ -1.54
SSR1P43307 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.43□□□□□ -1.54
SSR1P43307 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.43□□□□□ -1.54
SSR1P43307 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.43□□□□□ -1.54
SSR1P43307 WBP1LP8-201ENST00000617401 327 ntBASIC5.43□□□□□ -1.54
SSR1P43307 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.43□□□□□ -1.54
SSR1P43307 AC136428.4-201ENST00000634254 1155 ntBASIC5.43□□□□□ -1.54
SSR1P43307 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.43□□□□□ -1.54
SSR1P43307 MIR6715B-201ENST00000637172 77 ntBASIC5.43□□□□□ -1.54
SSR1P43307 AC135068.12-201ENST00000637370 931 ntBASIC5.43□□□□□ -1.54
SSR1P43307 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSR1P43307 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.43□□□□□ -1.54
SSR1P43307 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSR1P43307 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.43□□□□□ -1.54
SSR1P43307 AC006210.2-201ENST00000367074 1545 ntBASIC5.43□□□□□ -1.54
SSR1P43307 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms