Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FDFT1P37268 TVP23CP2-201ENST00000571473 623 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.04□□□□□ -1.6
FDFT1P37268 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.04□□□□□ -1.6
FDFT1P37268 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.04□□□□□ -1.6
FDFT1P37268 AL137246.1-201ENST00000607072 977 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 AL122125.1-201ENST00000616999 600 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.04□□□□□ -1.6
FDFT1P37268 RNU6-368P-201ENST00000620928 107 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 AC019206.1-201ENST00000621938 425 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 RNU6-538P-201ENST00000622329 107 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 AC006840.1-201ENST00000623069 542 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
FDFT1P37268 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.04□□□□□ -1.6
FDFT1P37268 DHX9P1-201ENST00000436565 3076 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 AC009643.2-201ENST00000603543 1448 ntBASIC5.04□□□□□ -1.6
FDFT1P37268 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FDFT1P37268 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
FDFT1P37268 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FDFT1P37268 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
FDFT1P37268 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.03□□□□□ -1.6
FDFT1P37268 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FDFT1P37268 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
FDFT1P37268 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.03□□□□□ -1.6
FDFT1P37268 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FDFT1P37268 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
FDFT1P37268 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.03□□□□□ -1.6
FDFT1P37268 AC021242.1-201ENST00000507315 2035 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 PABPC1P6-201ENST00000445594 1829 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FDFT1P37268 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
FDFT1P37268 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
FDFT1P37268 RNA5SP435-201ENST00000364044 108 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 Z97832.1-201ENST00000402490 328 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 AL391361.1-201ENST00000405580 489 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 RN7SKP206-201ENST00000410823 293 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 AP000534.2-201ENST00000412729 568 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.03□□□□□ -1.6
FDFT1P37268 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FDFT1P37268 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.03□□□□□ -1.6
FDFT1P37268 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.03□□□□□ -1.6
FDFT1P37268 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.03□□□□□ -1.6
FDFT1P37268 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.03□□□□□ -1.6
FDFT1P37268 RPL34P20-201ENST00000442771 351 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FDFT1P37268 AC079841.1-201ENST00000481228 950 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 AC020890.1-201ENST00000491837 504 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.03□□□□□ -1.6
FDFT1P37268 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.03□□□□□ -1.6
FDFT1P37268 RNA5SP43-201ENST00000516559 110 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.03□□□□□ -1.6
FDFT1P37268 AC026688.1-201ENST00000520639 1168 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.03□□□□□ -1.6
FDFT1P37268 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.03□□□□□ -1.6
FDFT1P37268 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.03□□□□□ -1.6
FDFT1P37268 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.03□□□□□ -1.6
FDFT1P37268 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
FDFT1P37268 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.03□□□□□ -1.6
FDFT1P37268 AC007225.2-201ENST00000562529 256 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.03□□□□□ -1.6
FDFT1P37268 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
FDFT1P37268 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.03□□□□□ -1.6
FDFT1P37268 MIR8069-1-201ENST00000616627 86 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 MIR8069-2-201ENST00000621412 86 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.03□□□□□ -1.6
FDFT1P37268 AC087821.1-201ENST00000623639 567 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.03□□□□□ -1.6
FDFT1P37268 MIR4302-201ENST00000638058 60 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
FDFT1P37268 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FDFT1P37268 AL034370.1-201ENST00000397254 1590 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 RLIMP2-201ENST00000427891 1563 ntBASIC5.03□□□□□ -1.6
FDFT1P37268 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FDFT1P37268 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
FDFT1P37268 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
FDFT1P37268 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
FDFT1P37268 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
FDFT1P37268 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
FDFT1P37268 MAPK10-349ENST00000641767 3661 ntBASIC5.02□□□□□ -1.61
FDFT1P37268 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
FDFT1P37268 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
FDFT1P37268 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
FDFT1P37268 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.02□□□□□ -1.61
FDFT1P37268 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
FDFT1P37268 RNU6-1331P-201ENST00000363658 106 ntBASIC5.02□□□□□ -1.61
FDFT1P37268 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.02□□□□□ -1.61
FDFT1P37268 EIF4HP2-201ENST00000424380 563 ntBASIC5.02□□□□□ -1.61
FDFT1P37268 CKS1BP6-201ENST00000424932 240 ntBASIC5.02□□□□□ -1.61
FDFT1P37268 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.02□□□□□ -1.61
FDFT1P37268 NFYAP1-201ENST00000431953 972 ntBASIC5.02□□□□□ -1.61
FDFT1P37268 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.02□□□□□ -1.61
FDFT1P37268 MRPL48P1-201ENST00000445390 636 ntBASIC5.02□□□□□ -1.61
FDFT1P37268 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.02□□□□□ -1.61
FDFT1P37268 RPL5P16-201ENST00000471467 790 ntBASIC5.02□□□□□ -1.61
FDFT1P37268 MIR3176-201ENST00000582210 90 ntBASIC5.02□□□□□ -1.61
FDFT1P37268 TAS2R6P-201ENST00000605022 826 ntBASIC5.02□□□□□ -1.61
FDFT1P37268 MIR6768-201ENST00000610734 72 ntBASIC5.02□□□□□ -1.61
FDFT1P37268 AL354950.1-201ENST00000614150 568 ntBASIC5.02□□□□□ -1.61
FDFT1P37268 AC243960.7-201ENST00000623532 707 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms