Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
HMGCLP35914 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGCLP35914 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.98□□□□□ -1.61
HMGCLP35914 AC011447.7-201ENST00000624228 1590 ntBASIC4.98□□□□□ -1.61
HMGCLP35914 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
HMGCLP35914 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCLP35914 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCLP35914 MUC2-202ENST00000613187 4845 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCLP35914 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCLP35914 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCLP35914 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCLP35914 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCLP35914 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCLP35914 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGCLP35914 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGCLP35914 MTCO1P22-201ENST00000604619 1360 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCLP35914 SNORA73.1-201ENST00000363107 205 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
HMGCLP35914 BMS1P3-201ENST00000372011 932 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HMGCLP35914 AP002530.1-201ENST00000405705 684 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 AC013429.2-201ENST00000418798 781 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGCLP35914 RPL34P6-201ENST00000432390 345 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGCLP35914 AL591363.1-201ENST00000450091 483 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.97□□□□□ -1.61
HMGCLP35914 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGCLP35914 RN7SL319P-201ENST00000480656 221 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 NPM1P29-201ENST00000483112 803 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 AC004453.1-201ENST00000487895 408 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.97□□□□□ -1.61
HMGCLP35914 AC140172.1-201ENST00000502928 141 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGCLP35914 OR5M14P-201ENST00000506803 618 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 RN7SKP5-201ENST00000517045 272 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGCLP35914 AC011840.5-201ENST00000582125 771 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 AC013244.1-201ENST00000604279 193 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 AC087783.2-201ENST00000605070 562 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 AL445222.1-201ENST00000607259 628 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 AL356752.1-201ENST00000615844 593 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 MIR7155-201ENST00000615925 56 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 AL049794.2-201ENST00000616301 365 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 AC037198.3-201ENST00000616754 526 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 AC112694.2-201ENST00000623697 768 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGCLP35914 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
HMGCLP35914 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCLP35914 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCLP35914 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCLP35914 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCLP35914 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HMGCLP35914 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCLP35914 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGCLP35914 AC068446.1-201ENST00000556425 1549 ntBASIC4.97□□□□□ -1.61
HMGCLP35914 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
HMGCLP35914 AC093775.1-201ENST00000624154 1868 ntBASIC4.96□□□□□ -1.61
HMGCLP35914 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.96□□□□□ -1.61
HMGCLP35914 AC008079.2-201ENST00000623543 20396 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMGCLP35914 AL606537.1-201ENST00000607258 2011 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGCLP35914 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGCLP35914 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMGCLP35914 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGCLP35914 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HMGCLP35914 SNORA70-201ENST00000384436 135 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGCLP35914 AL645927.1-201ENST00000396783 406 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 AL021331.1-201ENST00000402817 582 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGCLP35914 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGCLP35914 AF186996.5-201ENST00000418098 904 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 QRSL1P2-201ENST00000418582 964 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGCLP35914 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGCLP35914 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGCLP35914 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGCLP35914 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGCLP35914 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGCLP35914 RN7SL517P-201ENST00000462240 305 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 RN7SL97P-201ENST00000486780 299 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 OR2A3P-201ENST00000493774 953 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGCLP35914 CCNHP1-201ENST00000513311 678 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 RNU6-551P-201ENST00000516661 103 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 EIF4A2P5-201ENST00000529914 499 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGCLP35914 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGCLP35914 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGCLP35914 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGCLP35914 AC016180.1-201ENST00000567945 403 ntBASIC4.96□□□□□ -1.62
HMGCLP35914 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGCLP35914 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms