Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD13P35453 HSPA8P17-201ENST00000427029 1382 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
HOXD13P35453 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
HOXD13P35453 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXD13P35453 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD13P35453 AL450345.1-202ENST00000605741 3881 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.63□□□□□ -1.51
HOXD13P35453 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD13P35453 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HOXD13P35453 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD13P35453 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD13P35453 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD13P35453 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD13P35453 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXD13P35453 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD13P35453 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD13P35453 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
HOXD13P35453 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXD13P35453 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXD13P35453 RNA5SP187-201ENST00000384400 119 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 AC013442.1-201ENST00000397347 228 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 CHMP1B2P-201ENST00000399581 597 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXD13P35453 RN7SKP114-201ENST00000410327 279 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 AC002524.1-201ENST00000411687 547 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 GTF3AP1-201ENST00000416942 1004 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 AL139148.1-201ENST00000427122 680 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 RHOT1P3-201ENST00000436571 331 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXD13P35453 AC005532.2-201ENST00000467154 373 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD13P35453 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.62□□□□□ -1.51
HOXD13P35453 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.62□□□□□ -1.51
HOXD13P35453 SNRPCP2-201ENST00000504370 475 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 HIGD1AP14-201ENST00000507617 282 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXD13P35453 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXD13P35453 RPS27AP18-201ENST00000515536 459 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 FTH1P11-201ENST00000517577 551 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXD13P35453 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXD13P35453 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HOXD13P35453 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXD13P35453 AL049870.4-201ENST00000555741 486 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 AC023158.1-201ENST00000561632 1025 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXD13P35453 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXD13P35453 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXD13P35453 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXD13P35453 AC073592.7-201ENST00000623659 507 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXD13P35453 AC024341.1-201ENST00000526444 1552 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXD13P35453 AC011755.1-201ENST00000623763 2049 ntBASIC5.62□□□□□ -1.51
HOXD13P35453 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXD13P35453 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HOXD13P35453 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD13P35453 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HOXD13P35453 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD13P35453 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD13P35453 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXD13P35453 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HOXD13P35453 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD13P35453 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD13P35453 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXD13P35453 U3.7-201ENST00000363668 216 ntBASIC5.61□□□□□ -1.51
HOXD13P35453 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HOXD13P35453 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXD13P35453 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HOXD13P35453 SNORA2.3-201ENST00000383920 135 ntBASIC5.61□□□□□ -1.51
HOXD13P35453 RPL21P67-201ENST00000402896 478 ntBASIC5.61□□□□□ -1.51
HOXD13P35453 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD13P35453 AL035079.1-201ENST00000405210 287 ntBASIC5.61□□□□□ -1.51
HOXD13P35453 RN7SKP126-201ENST00000411143 300 ntBASIC5.61□□□□□ -1.51
HOXD13P35453 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD13P35453 AL513321.1-201ENST00000441175 761 ntBASIC5.61□□□□□ -1.51
HOXD13P35453 RPL34P20-201ENST00000442771 351 ntBASIC5.61□□□□□ -1.51
HOXD13P35453 SUMO2P1-206ENST00000445436 284 ntBASIC5.61□□□□□ -1.51
HOXD13P35453 AL035551.1-201ENST00000446931 348 ntBASIC5.61□□□□□ -1.51
HOXD13P35453 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXD13P35453 CDH12P2-201ENST00000504393 298 ntBASIC5.61□□□□□ -1.51
HOXD13P35453 AC011411.1-201ENST00000509592 876 ntBASIC5.61□□□□□ -1.51
HOXD13P35453 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.61□□□□□ -1.51
HOXD13P35453 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXD13P35453 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXD13P35453 NPM1P35-201ENST00000533043 868 ntBASIC5.61□□□□□ -1.51
HOXD13P35453 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
HOXD13P35453 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD13P35453 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXD13P35453 AC099494.2-201ENST00000623371 978 ntBASIC5.61□□□□□ -1.51
HOXD13P35453 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD13P35453 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD13P35453 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXD13P35453 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD13P35453 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD13P35453 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD13P35453 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD13P35453 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD13P35453 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms