Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXD12P35452 AC013437.2-201ENST00000639587 677 ntBASIC5.68□□□□□ -1.5
HOXD12P35452 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD12P35452 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD12P35452 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD12P35452 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD12P35452 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD12P35452 GVINP1-202ENST00000531871 7271 ntBASIC5.68□□□□□ -1.5
HOXD12P35452 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXD12P35452 MRE11P1-201ENST00000464884 2127 ntBASIC5.68□□□□□ -1.5
HOXD12P35452 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD12P35452 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD12P35452 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD12P35452 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HOXD12P35452 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD12P35452 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD12P35452 AL078621.3-201ENST00000623707 2042 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 AL359715.4-201ENST00000606629 1436 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD12P35452 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD12P35452 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
HOXD12P35452 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HOXD12P35452 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXD12P35452 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD12P35452 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD12P35452 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
HOXD12P35452 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD12P35452 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD12P35452 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD12P35452 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HOXD12P35452 CHMP1B2P-201ENST00000399581 597 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 AC233289.1-201ENST00000403700 508 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 RN7SKP151-201ENST00000410230 316 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 METTL15P3-201ENST00000415522 1221 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 AL158827.1-201ENST00000416300 391 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD12P35452 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD12P35452 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD12P35452 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD12P35452 MTCYBP15-201ENST00000433123 1127 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD12P35452 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD12P35452 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD12P35452 OTX2P1-201ENST00000450956 354 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD12P35452 AL445687.2-201ENST00000458156 728 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 RNU1-88P-201ENST00000459274 128 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 RN7SL809P-201ENST00000482040 297 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 RPL32P33-201ENST00000487023 394 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXD12P35452 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD12P35452 AC096571.1-202ENST00000506634 735 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD12P35452 AC112518.2-201ENST00000508565 425 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD12P35452 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HOXD12P35452 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD12P35452 OR4A17P-201ENST00000526032 904 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD12P35452 OR5D15P-201ENST00000531671 942 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD12P35452 AL390334.1-201ENST00000556395 450 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 OR4H6P-201ENST00000563771 921 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HOXD12P35452 AC009712.1-201ENST00000564938 316 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 SS18L2P2-201ENST00000583960 235 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD12P35452 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXD12P35452 uc_338.26-201ENST00000612659 160 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 AC008759.3-201ENST00000613300 508 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD12P35452 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD12P35452 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD12P35452 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD12P35452 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD12P35452 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXD12P35452 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HOXD12P35452 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD12P35452 BX005019.1-201ENST00000561881 1810 ntBASIC5.67□□□□□ -1.5
HOXD12P35452 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HOXD12P35452 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD12P35452 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD12P35452 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD12P35452 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HOXD12P35452 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXD12P35452 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD12P35452 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD12P35452 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD12P35452 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXD12P35452 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD12P35452 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD12P35452 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD12P35452 AC005294.1-201ENST00000355509 281 ntBASIC5.66□□□□□ -1.5
HOXD12P35452 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.66□□□□□ -1.5
HOXD12P35452 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD12P35452 MIR320B1-201ENST00000390209 79 ntBASIC5.66□□□□□ -1.5
HOXD12P35452 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms