Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
RXRBP28702 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RXRBP28702 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
RXRBP28702 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
RXRBP28702 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.58□□□□□ -1.2
RXRBP28702 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RXRBP28702 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RXRBP28702 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.58□□□□□ -1.2
RXRBP28702 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.58□□□□□ -1.2
RXRBP28702 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RXRBP28702 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
RXRBP28702 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
RXRBP28702 RNA5SP479-201ENST00000364858 117 ntBASIC7.58□□□□□ -1.2
RXRBP28702 OR5H15-201ENST00000383696 930 ntBASIC7.58□□□□□ -1.2
RXRBP28702 RNU5A-2P-201ENST00000384337 116 ntBASIC7.58□□□□□ -1.2
RXRBP28702 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
RXRBP28702 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.58□□□□□ -1.2
RXRBP28702 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC7.58□□□□□ -1.2
RXRBP28702 SCP2-206ENST00000430330 938 ntTSL 2 BASIC7.58□□□□□ -1.2
RXRBP28702 MORF4L1P5-201ENST00000433352 961 ntBASIC7.58□□□□□ -1.2
RXRBP28702 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC7.58□□□□□ -1.2
RXRBP28702 AC023141.8-201ENST00000442554 208 ntBASIC7.58□□□□□ -1.2
RXRBP28702 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RXRBP28702 RN7SL570P-201ENST00000484405 292 ntBASIC7.58□□□□□ -1.2
RXRBP28702 RPS12P31-201ENST00000491419 398 ntBASIC7.58□□□□□ -1.2
RXRBP28702 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.58□□□□□ -1.2
RXRBP28702 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC7.58□□□□□ -1.2
RXRBP28702 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC7.58□□□□□ -1.2
RXRBP28702 OR4A17P-201ENST00000526032 904 ntBASIC7.58□□□□□ -1.2
RXRBP28702 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC7.58□□□□□ -1.2
RXRBP28702 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.58□□□□□ -1.2
RXRBP28702 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.58□□□□□ -1.2
RXRBP28702 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.58□□□□□ -1.2
RXRBP28702 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7.58□□□□□ -1.2
RXRBP28702 OR7A8P-201ENST00000595427 913 ntBASIC7.58□□□□□ -1.2
RXRBP28702 MIMT1-201ENST00000597105 1050 ntBASIC7.58□□□□□ -1.2
RXRBP28702 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.58□□□□□ -1.2
RXRBP28702 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC7.58□□□□□ -1.2
RXRBP28702 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.58□□□□□ -1.2
RXRBP28702 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.58□□□□□ -1.2
RXRBP28702 AL118522.2-201ENST00000616045 615 ntBASIC7.58□□□□□ -1.2
RXRBP28702 AC099842.1-201ENST00000619919 596 ntBASIC7.58□□□□□ -1.2
RXRBP28702 UGP2-231ENST00000627474 264 ntTSL 5 BASIC7.58□□□□□ -1.2
RXRBP28702 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
RXRBP28702 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
RXRBP28702 AL049737.1-201ENST00000413920 1403 ntBASIC7.58□□□□□ -1.2
RXRBP28702 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
RXRBP28702 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.58□□□□□ -1.2
RXRBP28702 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RXRBP28702 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
RXRBP28702 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RXRBP28702 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC7.58□□□□□ -1.2
RXRBP28702 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RXRBP28702 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.57□□□□□ -1.2
RXRBP28702 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RXRBP28702 MFSD8-216ENST00000641147 4009 ntBASIC7.57□□□□□ -1.2
RXRBP28702 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
RXRBP28702 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RXRBP28702 AL133243.4-201ENST00000623116 3109 ntBASIC7.57□□□□□ -1.2
RXRBP28702 THAP12P8-201ENST00000447914 2115 ntBASIC7.57□□□□□ -1.2
RXRBP28702 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RXRBP28702 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RXRBP28702 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
RXRBP28702 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RXRBP28702 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.57□□□□□ -1.2
RXRBP28702 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RXRBP28702 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RXRBP28702 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
RXRBP28702 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RXRBP28702 RNY3P14-201ENST00000384309 102 ntBASIC7.57□□□□□ -1.2
RXRBP28702 SNORA48.7-201ENST00000391302 135 ntBASIC7.57□□□□□ -1.2
RXRBP28702 NPM1P40-201ENST00000412758 733 ntBASIC7.57□□□□□ -1.2
RXRBP28702 AC011233.1-201ENST00000422812 283 ntBASIC7.57□□□□□ -1.2
RXRBP28702 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC7.57□□□□□ -1.2
RXRBP28702 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC7.57□□□□□ -1.2
RXRBP28702 AC068287.1-201ENST00000430283 295 ntBASIC7.57□□□□□ -1.2
RXRBP28702 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC7.57□□□□□ -1.2
RXRBP28702 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.57□□□□□ -1.2
RXRBP28702 MGAT2P1-201ENST00000449718 797 ntBASIC7.57□□□□□ -1.2
RXRBP28702 OR52Y1P-201ENST00000452418 828 ntBASIC7.57□□□□□ -1.2
RXRBP28702 OSTCP1-201ENST00000455507 450 ntBASIC7.57□□□□□ -1.2
RXRBP28702 AL157777.1-201ENST00000468100 304 ntBASIC7.57□□□□□ -1.2
RXRBP28702 DEFB109A-201ENST00000482450 265 ntBASIC7.57□□□□□ -1.2
RXRBP28702 AC026979.1-201ENST00000492525 396 ntBASIC7.57□□□□□ -1.2
RXRBP28702 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC7.57□□□□□ -1.2
RXRBP28702 MTND4LP26-201ENST00000518144 282 ntBASIC7.57□□□□□ -1.2
RXRBP28702 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC7.57□□□□□ -1.2
RXRBP28702 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.57□□□□□ -1.2
RXRBP28702 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC7.57□□□□□ -1.2
RXRBP28702 AC006362.1-201ENST00000567392 174 ntBASIC7.57□□□□□ -1.2
RXRBP28702 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
RXRBP28702 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.57□□□□□ -1.2
RXRBP28702 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC7.57□□□□□ -1.2
RXRBP28702 TEX41-238ENST00000604253 709 ntTSL 5 BASIC7.57□□□□□ -1.2
RXRBP28702 RN7SKP299-201ENST00000606679 301 ntBASIC7.57□□□□□ -1.2
RXRBP28702 OR7M1P-201ENST00000608946 533 ntBASIC7.57□□□□□ -1.2
RXRBP28702 AC024257.5-201ENST00000612739 531 ntBASIC7.57□□□□□ -1.2
RXRBP28702 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC7.57□□□□□ -1.2
RXRBP28702 AC091932.2-201ENST00000623014 291 ntBASIC7.57□□□□□ -1.2
RXRBP28702 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms