Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
MMP11P24347 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MMP11P24347 RNA5SP455-201ENST00000365190 119 ntBASIC4.81□□□□□ -1.64
MMP11P24347 GNG5P5-201ENST00000420444 220 ntBASIC4.81□□□□□ -1.64
MMP11P24347 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.81□□□□□ -1.64
MMP11P24347 CYCSP24-201ENST00000445119 316 ntBASIC4.81□□□□□ -1.64
MMP11P24347 SUMO2P1-206ENST00000445436 284 ntBASIC4.81□□□□□ -1.64
MMP11P24347 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.81□□□□□ -1.64
MMP11P24347 BX842559.2-201ENST00000451418 605 ntBASIC4.81□□□□□ -1.64
MMP11P24347 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.81□□□□□ -1.64
MMP11P24347 RPS3AP41-201ENST00000462701 778 ntBASIC4.81□□□□□ -1.64
MMP11P24347 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.81□□□□□ -1.64
MMP11P24347 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.81□□□□□ -1.64
MMP11P24347 OR9N1P-201ENST00000491296 333 ntBASIC4.81□□□□□ -1.64
MMP11P24347 RN7SL244P-201ENST00000493405 297 ntBASIC4.81□□□□□ -1.64
MMP11P24347 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.81□□□□□ -1.64
MMP11P24347 COX6B1P5-201ENST00000509843 249 ntBASIC4.81□□□□□ -1.64
MMP11P24347 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MMP11P24347 AC005000.1-201ENST00000536192 288 ntBASIC4.81□□□□□ -1.64
MMP11P24347 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.81□□□□□ -1.64
MMP11P24347 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.81□□□□□ -1.64
MMP11P24347 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.81□□□□□ -1.64
MMP11P24347 MIR4691-201ENST00000583764 85 ntBASIC4.81□□□□□ -1.64
MMP11P24347 AP001542.1-201ENST00000591314 200 ntBASIC4.81□□□□□ -1.64
MMP11P24347 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.81□□□□□ -1.64
MMP11P24347 AC243960.7-201ENST00000623532 707 ntBASIC4.81□□□□□ -1.64
MMP11P24347 AC073342.3-201ENST00000624211 193 ntBASIC4.81□□□□□ -1.64
MMP11P24347 THAP12P5-201ENST00000405864 2275 ntBASIC4.81□□□□□ -1.64
MMP11P24347 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.81□□□□□ -1.64
MMP11P24347 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.81□□□□□ -1.64
MMP11P24347 SAMMSON-213ENST00000641336 1521 ntBASIC4.81□□□□□ -1.64
MMP11P24347 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.81□□□□□ -1.64
MMP11P24347 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
MMP11P24347 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MMP11P24347 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MMP11P24347 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
MMP11P24347 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP11P24347 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
MMP11P24347 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.8□□□□□ -1.64
MMP11P24347 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.8□□□□□ -1.64
MMP11P24347 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
MMP11P24347 AC097461.1-201ENST00000568928 2821 ntBASIC4.8□□□□□ -1.64
MMP11P24347 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP11P24347 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
MMP11P24347 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP11P24347 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP11P24347 Z97832.1-201ENST00000402490 328 ntBASIC4.8□□□□□ -1.64
MMP11P24347 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP11P24347 RPL37P18-201ENST00000411602 243 ntBASIC4.8□□□□□ -1.64
MMP11P24347 AC104333.2-201ENST00000422630 192 ntBASIC4.8□□□□□ -1.64
MMP11P24347 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.8□□□□□ -1.64
MMP11P24347 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.8□□□□□ -1.64
MMP11P24347 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.8□□□□□ -1.64
MMP11P24347 RPL31P44-201ENST00000447680 377 ntBASIC4.8□□□□□ -1.64
MMP11P24347 AC091685.2-201ENST00000454924 864 ntBASIC4.8□□□□□ -1.64
MMP11P24347 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.8□□□□□ -1.64
MMP11P24347 snoU13.20-201ENST00000459180 104 ntBASIC4.8□□□□□ -1.64
MMP11P24347 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.8□□□□□ -1.64
MMP11P24347 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.8□□□□□ -1.64
MMP11P24347 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.8□□□□□ -1.64
MMP11P24347 OR7E128P-201ENST00000532736 1024 ntBASIC4.8□□□□□ -1.64
MMP11P24347 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.8□□□□□ -1.64
MMP11P24347 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.8□□□□□ -1.64
MMP11P24347 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.8□□□□□ -1.64
MMP11P24347 MIR4675-201ENST00000577898 77 ntBASIC4.8□□□□□ -1.64
MMP11P24347 SNORD39.2-201ENST00000579995 76 ntBASIC4.8□□□□□ -1.64
MMP11P24347 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.8□□□□□ -1.64
MMP11P24347 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.8□□□□□ -1.64
MMP11P24347 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.8□□□□□ -1.64
MMP11P24347 AL136295.6-201ENST00000610486 658 ntBASIC4.8□□□□□ -1.64
MMP11P24347 AL627230.1-201ENST00000613077 211 ntBASIC4.8□□□□□ -1.64
MMP11P24347 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.8□□□□□ -1.64
MMP11P24347 AC100827.5-201ENST00000615883 426 ntBASIC4.8□□□□□ -1.64
MMP11P24347 AL591926.8-201ENST00000616876 211 ntBASIC4.8□□□□□ -1.64
MMP11P24347 AL122125.1-201ENST00000616999 600 ntBASIC4.8□□□□□ -1.64
MMP11P24347 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.8□□□□□ -1.64
MMP11P24347 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.8□□□□□ -1.64
MMP11P24347 AC073869.10-201ENST00000642016 354 ntBASIC4.8□□□□□ -1.64
MMP11P24347 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
MMP11P24347 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.8□□□□□ -1.64
MMP11P24347 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
MMP11P24347 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP11P24347 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.8□□□□□ -1.64
MMP11P24347 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
MMP11P24347 AC007996.1-201ENST00000620414 2821 ntBASIC4.8□□□□□ -1.64
MMP11P24347 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP11P24347 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
MMP11P24347 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
MMP11P24347 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP11P24347 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
MMP11P24347 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MMP11P24347 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.79□□□□□ -1.64
MMP11P24347 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.79□□□□□ -1.64
MMP11P24347 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MMP11P24347 RLIMP2-201ENST00000427891 1563 ntBASIC4.79□□□□□ -1.64
MMP11P24347 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.79□□□□□ -1.64
MMP11P24347 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
MMP11P24347 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MMP11P24347 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.79□□□□□ -1.64
MMP11P24347 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms