Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
ERCC3P19447 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC3P19447 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
ERCC3P19447 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC3P19447 Y_RNA.201-201ENST00000364052 96 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 RNU6-304P-201ENST00000364855 107 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.29□□□□□ -1.24
ERCC3P19447 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC3P19447 AL161909.1-201ENST00000397390 712 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 AL596448.1-201ENST00000415024 392 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 P2RY10P2-201ENST00000416730 913 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.29□□□□□ -1.24
ERCC3P19447 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC3P19447 AL022400.1-201ENST00000423946 935 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 MTCO3P5-201ENST00000433620 714 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 AC098826.1-201ENST00000433943 471 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.29□□□□□ -1.24
ERCC3P19447 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC3P19447 AC023141.3-201ENST00000436698 278 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 MTCO2P16-201ENST00000436962 677 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC3P19447 MTCYBP3-201ENST00000445588 1137 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC3P19447 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC3P19447 HLA-DPA3-207ENST00000454398 229 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 AC098847.1-201ENST00000473094 348 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC3P19447 MTCYBP16-201ENST00000509187 1129 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 IGHV3-57-201ENST00000520143 280 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC7.29□□□□□ -1.24
ERCC3P19447 AKIRIN1P1-201ENST00000547384 544 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 AL121766.1-201ENST00000547436 487 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC3P19447 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.29□□□□□ -1.24
ERCC3P19447 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC3P19447 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC3P19447 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
ERCC3P19447 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC7.29□□□□□ -1.24
ERCC3P19447 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC7.29□□□□□ -1.24
ERCC3P19447 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC7.29□□□□□ -1.24
ERCC3P19447 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC3P19447 AC008521.2-201ENST00000591021 259 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 AL390838.2-201ENST00000602394 274 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC7.29□□□□□ -1.24
ERCC3P19447 AC073862.4-201ENST00000622982 854 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC3P19447 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC3P19447 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
ERCC3P19447 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.29□□□□□ -1.24
ERCC3P19447 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
ERCC3P19447 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC3P19447 HSPA8P17-201ENST00000427029 1382 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 AC119744.1-201ENST00000454746 1715 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC3P19447 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
ERCC3P19447 AL390862.1-201ENST00000635467 1469 ntBASIC7.29□□□□□ -1.24
ERCC3P19447 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ERCC3P19447 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC3P19447 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC3P19447 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
ERCC3P19447 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
ERCC3P19447 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.28□□□□□ -1.24
ERCC3P19447 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC3P19447 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC3P19447 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC3P19447 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC3P19447 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC3P19447 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC3P19447 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
ERCC3P19447 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC3P19447 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC3P19447 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC3P19447 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
ERCC3P19447 Y_RNA.51-201ENST00000362725 102 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC3P19447 AC104843.2-201ENST00000427666 297 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 AC073069.1-201ENST00000428657 441 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 AL353662.1-201ENST00000439099 327 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 AC073648.4-201ENST00000442655 781 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 AC073109.1-201ENST00000445066 978 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 MTCO3P16-201ENST00000454456 754 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 RPL5P24-201ENST00000463742 885 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC3P19447 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC3P19447 AC011411.1-201ENST00000509592 876 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC3P19447 AC048346.1-201ENST00000510247 144 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 MTATP6P1-201ENST00000514057 681 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 TCP11X3P-202ENST00000514289 1254 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 RNU6-1225P-201ENST00000516336 65 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.28□□□□□ -1.24
ERCC3P19447 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.28□□□□□ -1.24
ERCC3P19447 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC7.28□□□□□ -1.24
ERCC3P19447 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.28□□□□□ -1.24
ERCC3P19447 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC7.28□□□□□ -1.24
ERCC3P19447 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.28□□□□□ -1.24
ERCC3P19447 MIR3915-201ENST00000578518 97 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC3P19447 VN1R84P-201ENST00000593697 235 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 AC119751.7-201ENST00000600494 245 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms