Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 NDUFA5P8-201ENST00000449019 346 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 BX842559.2-201ENST00000451418 605 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 SBDSP1-204ENST00000453858 737 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.01□□□□□ -1.61
XRCC1P18887 HMGN2P25-201ENST00000486956 268 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.01□□□□□ -1.61
XRCC1P18887 NDUFB5P1-201ENST00000508134 564 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 AC105031.1-201ENST00000518550 476 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.01□□□□□ -1.61
XRCC1P18887 OR10D4P-201ENST00000525892 951 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 AC011270.1-201ENST00000558606 583 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 DPRXP4-201ENST00000578053 568 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.01□□□□□ -1.61
XRCC1P18887 QTRT1P1-201ENST00000604344 1078 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 EIF3FP1-201ENST00000613970 806 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 AC108359.1-201ENST00000616451 1211 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
XRCC1P18887 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.01□□□□□ -1.61
XRCC1P18887 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
XRCC1P18887 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.01□□□□□ -1.61
XRCC1P18887 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
XRCC1P18887 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
XRCC1P18887 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5□□□□□ -1.61
XRCC1P18887 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5□□□□□ -1.61
XRCC1P18887 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
XRCC1P18887 AL109941.1-201ENST00000401925 229 ntBASIC5□□□□□ -1.61
XRCC1P18887 AL133270.1-201ENST00000402635 279 ntBASIC5□□□□□ -1.61
XRCC1P18887 RPL36AP10-201ENST00000421785 322 ntBASIC5□□□□□ -1.61
XRCC1P18887 RBMY2QP-201ENST00000429799 1147 ntBASIC5□□□□□ -1.61
XRCC1P18887 AC009238.2-201ENST00000431026 355 ntBASIC5□□□□□ -1.61
XRCC1P18887 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5□□□□□ -1.61
XRCC1P18887 RPL12P3-201ENST00000440080 396 ntBASIC5□□□□□ -1.61
XRCC1P18887 MTND6P5-201ENST00000448266 512 ntBASIC5□□□□□ -1.61
XRCC1P18887 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5□□□□□ -1.61
XRCC1P18887 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5□□□□□ -1.61
XRCC1P18887 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5□□□□□ -1.61
XRCC1P18887 OTX2P1-201ENST00000450956 354 ntBASIC5□□□□□ -1.61
XRCC1P18887 FCF1P7-201ENST00000451185 558 ntBASIC5□□□□□ -1.61
XRCC1P18887 AL645937.3-201ENST00000453647 936 ntBASIC5□□□□□ -1.61
XRCC1P18887 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5□□□□□ -1.61
XRCC1P18887 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
XRCC1P18887 RN7SL244P-201ENST00000493405 297 ntBASIC5□□□□□ -1.61
XRCC1P18887 AC097173.1-201ENST00000505862 819 ntBASIC5□□□□□ -1.61
XRCC1P18887 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5□□□□□ -1.61
XRCC1P18887 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5□□□□□ -1.61
XRCC1P18887 RNA5SP303-201ENST00000516192 130 ntBASIC5□□□□□ -1.61
XRCC1P18887 NPM1P52-201ENST00000518264 846 ntBASIC5□□□□□ -1.61
XRCC1P18887 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5□□□□□ -1.61
XRCC1P18887 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5□□□□□ -1.61
XRCC1P18887 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5□□□□□ -1.61
XRCC1P18887 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5□□□□□ -1.61
XRCC1P18887 AC126323.6-202ENST00000568092 3511 ntBASIC5□□□□□ -1.61
XRCC1P18887 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 EEF1A1P36-201ENST00000427807 1351 ntBASIC5□□□□□ -1.61
XRCC1P18887 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5□□□□□ -1.61
XRCC1P18887 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5□□□□□ -1.61
XRCC1P18887 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5□□□□□ -1.61
XRCC1P18887 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
XRCC1P18887 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5□□□□□ -1.61
XRCC1P18887 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
XRCC1P18887 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
XRCC1P18887 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.99□□□□□ -1.61
XRCC1P18887 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.99□□□□□ -1.61
XRCC1P18887 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
XRCC1P18887 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
XRCC1P18887 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.99□□□□□ -1.61
XRCC1P18887 Z95331.1-201ENST00000623075 23112 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.99□□□□□ -1.61
XRCC1P18887 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
XRCC1P18887 AC011503.2-201ENST00000594230 1500 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
XRCC1P18887 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
XRCC1P18887 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
XRCC1P18887 RN7SKP113-201ENST00000363891 295 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.99□□□□□ -1.61
XRCC1P18887 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
XRCC1P18887 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
XRCC1P18887 MIR550A3-201ENST00000390735 95 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 AC098592.2-201ENST00000413158 265 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 GJA6P-201ENST00000415117 1042 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.99□□□□□ -1.61
XRCC1P18887 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.99□□□□□ -1.61
XRCC1P18887 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.99□□□□□ -1.61
XRCC1P18887 TPTE2P1-204ENST00000435256 593 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms