Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CXADRP3-202ENST00000617265 1100 ntBASIC4.67□□□□□ -1.66
NCK1P16333 AF117829.2-201ENST00000619538 361 ntBASIC4.67□□□□□ -1.66
NCK1P16333 AC015722.2-201ENST00000622210 551 ntBASIC4.67□□□□□ -1.66
NCK1P16333 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NCK1P16333 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NCK1P16333 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NCK1P16333 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NCK1P16333 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NCK1P16333 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NCK1P16333 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
NCK1P16333 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NCK1P16333 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.67□□□□□ -1.66
NCK1P16333 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NCK1P16333 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NCK1P16333 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NCK1P16333 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.66□□□□□ -1.66
NCK1P16333 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NCK1P16333 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NCK1P16333 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NCK1P16333 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NCK1P16333 UGT2B26P-201ENST00000508672 1613 ntBASIC4.66□□□□□ -1.66
NCK1P16333 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NCK1P16333 AC107977.1-201ENST00000355745 939 ntBASIC4.66□□□□□ -1.66
NCK1P16333 RNU6-670P-201ENST00000364312 104 ntBASIC4.66□□□□□ -1.66
NCK1P16333 RNA5SP284-201ENST00000384547 118 ntBASIC4.66□□□□□ -1.66
NCK1P16333 AP000580.1-201ENST00000404439 358 ntBASIC4.66□□□□□ -1.66
NCK1P16333 AL512422.1-201ENST00000407033 553 ntBASIC4.66□□□□□ -1.66
NCK1P16333 ARAFP1-201ENST00000422172 605 ntBASIC4.66□□□□□ -1.66
NCK1P16333 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.66□□□□□ -1.66
NCK1P16333 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NCK1P16333 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NCK1P16333 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.66□□□□□ -1.66
NCK1P16333 AP000936.3-201ENST00000438127 255 ntBASIC4.66□□□□□ -1.66
NCK1P16333 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NCK1P16333 AL591623.2-201ENST00000449978 222 ntBASIC4.66□□□□□ -1.66
NCK1P16333 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.66□□□□□ -1.66
NCK1P16333 AC037198.2-201ENST00000478845 733 ntBASIC4.66□□□□□ -1.66
NCK1P16333 AC147055.1-201ENST00000509261 750 ntBASIC4.66□□□□□ -1.66
NCK1P16333 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.66□□□□□ -1.66
NCK1P16333 AC022826.1-201ENST00000519383 805 ntBASIC4.66□□□□□ -1.66
NCK1P16333 AC026688.1-201ENST00000520639 1168 ntBASIC4.66□□□□□ -1.66
NCK1P16333 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.66□□□□□ -1.66
NCK1P16333 TOMM20P1-201ENST00000534518 427 ntBASIC4.66□□□□□ -1.66
NCK1P16333 OR8X1P-201ENST00000534542 869 ntBASIC4.66□□□□□ -1.66
NCK1P16333 AC027544.3-201ENST00000535082 757 ntBASIC4.66□□□□□ -1.66
NCK1P16333 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NCK1P16333 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.66□□□□□ -1.66
NCK1P16333 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NCK1P16333 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.66□□□□□ -1.66
NCK1P16333 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.66□□□□□ -1.66
NCK1P16333 AC104687.2-201ENST00000604442 342 ntBASIC4.66□□□□□ -1.66
NCK1P16333 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.66□□□□□ -1.66
NCK1P16333 AC019131.2-201ENST00000609071 870 ntBASIC4.66□□□□□ -1.66
NCK1P16333 RN7SL787P-201ENST00000613000 284 ntBASIC4.66□□□□□ -1.66
NCK1P16333 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.66□□□□□ -1.66
NCK1P16333 AL359742.1-201ENST00000622497 540 ntBASIC4.66□□□□□ -1.66
NCK1P16333 AC015804.1-201ENST00000622935 435 ntBASIC4.66□□□□□ -1.66
NCK1P16333 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.66□□□□□ -1.66
NCK1P16333 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NCK1P16333 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NCK1P16333 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NCK1P16333 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.66□□□□□ -1.66
NCK1P16333 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.66□□□□□ -1.66
NCK1P16333 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.66□□□□□ -1.66
NCK1P16333 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.66□□□□□ -1.66
NCK1P16333 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NCK1P16333 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.65□□□□□ -1.66
NCK1P16333 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NCK1P16333 AC087565.3-202ENST00000642085 1603 ntBASIC4.65□□□□□ -1.66
NCK1P16333 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NCK1P16333 RNA5SP510-201ENST00000364697 99 ntBASIC4.65□□□□□ -1.67
NCK1P16333 SNORA66-201ENST00000384792 133 ntBASIC4.65□□□□□ -1.67
NCK1P16333 SNORD96B-201ENST00000386148 79 ntBASIC4.65□□□□□ -1.67
NCK1P16333 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
NCK1P16333 AC233289.1-201ENST00000403700 508 ntBASIC4.65□□□□□ -1.67
NCK1P16333 NUDT19P3-201ENST00000404698 555 ntBASIC4.65□□□□□ -1.67
NCK1P16333 RN7SKP114-201ENST00000410327 279 ntBASIC4.65□□□□□ -1.67
NCK1P16333 RN7SKP286-201ENST00000410894 299 ntBASIC4.65□□□□□ -1.67
NCK1P16333 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.65□□□□□ -1.67
NCK1P16333 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.65□□□□□ -1.67
NCK1P16333 AC013470.3-201ENST00000420252 1194 ntBASIC4.65□□□□□ -1.67
NCK1P16333 E2F6P2-201ENST00000420708 748 ntBASIC4.65□□□□□ -1.67
NCK1P16333 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NCK1P16333 FABP7P1-201ENST00000424004 391 ntBASIC4.65□□□□□ -1.67
NCK1P16333 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.65□□□□□ -1.67
NCK1P16333 AC092162.1-201ENST00000432828 434 ntBASIC4.65□□□□□ -1.67
NCK1P16333 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.65□□□□□ -1.67
NCK1P16333 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.65□□□□□ -1.67
NCK1P16333 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.65□□□□□ -1.67
NCK1P16333 RPS29P9-201ENST00000440360 171 ntBASIC4.65□□□□□ -1.67
NCK1P16333 HMGN1P2-201ENST00000445197 310 ntBASIC4.65□□□□□ -1.67
NCK1P16333 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NCK1P16333 YWHAEP1-201ENST00000453697 763 ntBASIC4.65□□□□□ -1.67
NCK1P16333 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.65□□□□□ -1.67
NCK1P16333 AC007998.1-201ENST00000474156 672 ntBASIC4.65□□□□□ -1.67
NCK1P16333 RPL5P22-201ENST00000480199 884 ntBASIC4.65□□□□□ -1.67
NCK1P16333 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NCK1P16333 HAUS1P1-201ENST00000505275 832 ntBASIC4.65□□□□□ -1.67
NCK1P16333 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.65□□□□□ -1.67
NCK1P16333 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms