Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.4□□□□□ -1.54
PDGFRAP16234 LYPLA1P1-201ENST00000434514 622 ntBASIC5.4□□□□□ -1.54
PDGFRAP16234 MRPS33P4-201ENST00000434892 317 ntBASIC5.4□□□□□ -1.54
PDGFRAP16234 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.4□□□□□ -1.54
PDGFRAP16234 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.4□□□□□ -1.54
PDGFRAP16234 NIFKP7-201ENST00000503365 834 ntBASIC5.4□□□□□ -1.54
PDGFRAP16234 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.4□□□□□ -1.54
PDGFRAP16234 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.4□□□□□ -1.54
PDGFRAP16234 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.4□□□□□ -1.54
PDGFRAP16234 AC022832.1-201ENST00000530718 645 ntBASIC5.4□□□□□ -1.54
PDGFRAP16234 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFRAP16234 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.4□□□□□ -1.54
PDGFRAP16234 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.4□□□□□ -1.54
PDGFRAP16234 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.4□□□□□ -1.54
PDGFRAP16234 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.4□□□□□ -1.54
PDGFRAP16234 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.4□□□□□ -1.54
PDGFRAP16234 AL137072.1-201ENST00000603444 466 ntBASIC5.4□□□□□ -1.54
PDGFRAP16234 AC004241.3-201ENST00000611728 517 ntBASIC5.4□□□□□ -1.54
PDGFRAP16234 AL139407.1-201ENST00000613826 1175 ntBASIC5.4□□□□□ -1.54
PDGFRAP16234 RPSAP73-201ENST00000614820 330 ntBASIC5.4□□□□□ -1.54
PDGFRAP16234 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.4□□□□□ -1.54
PDGFRAP16234 ZNF733P-202ENST00000444809 1573 ntBASIC5.4□□□□□ -1.55
PDGFRAP16234 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PDGFRAP16234 MAPK10-338ENST00000641647 3362 ntBASIC5.4□□□□□ -1.55
PDGFRAP16234 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PDGFRAP16234 RBPJP2-201ENST00000618187 1444 ntBASIC5.4□□□□□ -1.55
PDGFRAP16234 MAPK10-328ENST00000641553 4009 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFRAP16234 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PDGFRAP16234 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFRAP16234 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PDGFRAP16234 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFRAP16234 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFRAP16234 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFRAP16234 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFRAP16234 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFRAP16234 SNORA17.1-201ENST00000362945 126 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 RNU4-44P-201ENST00000363050 141 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 RNA5SP507-201ENST00000363603 121 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PDGFRAP16234 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFRAP16234 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFRAP16234 SNORA70-201ENST00000384436 135 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PDGFRAP16234 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFRAP16234 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PDGFRAP16234 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.39□□□□□ -1.55
PDGFRAP16234 PTMAP6-201ENST00000439110 327 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFRAP16234 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFRAP16234 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFRAP16234 VN1R48P-201ENST00000448149 1036 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 AC093890.1-201ENST00000502554 540 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 MYL12BP2-201ENST00000503948 512 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFRAP16234 AC067904.2-201ENST00000517322 1283 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 OR4A46P-201ENST00000527255 933 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PDGFRAP16234 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.39□□□□□ -1.55
PDGFRAP16234 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFRAP16234 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.39□□□□□ -1.55
PDGFRAP16234 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFRAP16234 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.39□□□□□ -1.55
PDGFRAP16234 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFRAP16234 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFRAP16234 KATNBL1P1-201ENST00000605192 748 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFRAP16234 AL021707.7-201ENST00000607991 416 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 AC108359.1-201ENST00000616451 1211 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFRAP16234 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.39□□□□□ -1.55
PDGFRAP16234 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFRAP16234 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFRAP16234 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.39□□□□□ -1.55
PDGFRAP16234 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFRAP16234 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.39□□□□□ -1.55
PDGFRAP16234 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.39□□□□□ -1.55
PDGFRAP16234 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFRAP16234 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PDGFRAP16234 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFRAP16234 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
PDGFRAP16234 PANDAR-201ENST00000629595 1506 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PDGFRAP16234 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PDGFRAP16234 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.38□□□□□ -1.55
PDGFRAP16234 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFRAP16234 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFRAP16234 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFRAP16234 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PDGFRAP16234 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFRAP16234 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFRAP16234 RNU1-106P-201ENST00000384382 164 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PDGFRAP16234 AL035079.1-201ENST00000405210 287 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 AL589655.1-201ENST00000405398 482 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFRAP16234 MTCYBP7-201ENST00000419540 1134 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PDGFRAP16234 AL590623.1-201ENST00000427864 105 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms