Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT3P12035 RNU6-697P-201ENST00000363348 107 ntBASIC5.29□□□□□ -1.56
KRT3P12035 RN7SKP269-201ENST00000365545 319 ntBASIC5.29□□□□□ -1.56
KRT3P12035 RNU6-1263P-201ENST00000384601 106 ntBASIC5.29□□□□□ -1.56
KRT3P12035 AC092642.1-201ENST00000392417 425 ntBASIC5.29□□□□□ -1.56
KRT3P12035 AC013442.1-201ENST00000397347 228 ntBASIC5.29□□□□□ -1.56
KRT3P12035 MTND3P20-201ENST00000407663 186 ntBASIC5.29□□□□□ -1.56
KRT3P12035 AC005033.1-201ENST00000428904 813 ntBASIC5.29□□□□□ -1.56
KRT3P12035 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.29□□□□□ -1.56
KRT3P12035 RPL35AP21-201ENST00000437667 333 ntBASIC5.29□□□□□ -1.56
KRT3P12035 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.29□□□□□ -1.56
KRT3P12035 RPS29P9-201ENST00000440360 171 ntBASIC5.29□□□□□ -1.56
KRT3P12035 AL450023.3-201ENST00000440592 271 ntBASIC5.29□□□□□ -1.56
KRT3P12035 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT3P12035 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT3P12035 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT3P12035 HMGB1P4-201ENST00000455362 567 ntBASIC5.29□□□□□ -1.56
KRT3P12035 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT3P12035 HMGN2P25-201ENST00000486956 268 ntBASIC5.29□□□□□ -1.56
KRT3P12035 AC073073.1-201ENST00000493920 463 ntBASIC5.29□□□□□ -1.56
KRT3P12035 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT3P12035 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT3P12035 AL671862.1-201ENST00000515851 349 ntBASIC5.29□□□□□ -1.56
KRT3P12035 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT3P12035 AC022832.1-201ENST00000530718 645 ntBASIC5.29□□□□□ -1.56
KRT3P12035 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT3P12035 SETP1-201ENST00000556014 845 ntBASIC5.29□□□□□ -1.56
KRT3P12035 AC067805.1-201ENST00000559344 470 ntBASIC5.29□□□□□ -1.56
KRT3P12035 AC011840.5-201ENST00000582125 771 ntBASIC5.29□□□□□ -1.56
KRT3P12035 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT3P12035 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT3P12035 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT3P12035 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT3P12035 AC105254.2-201ENST00000603636 436 ntBASIC5.29□□□□□ -1.56
KRT3P12035 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.29□□□□□ -1.56
KRT3P12035 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT3P12035 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT3P12035 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT3P12035 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT3P12035 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT3P12035 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
KRT3P12035 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT3P12035 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT3P12035 AC100778.3-201ENST00000580060 1750 ntBASIC5.29□□□□□ -1.56
KRT3P12035 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT3P12035 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT3P12035 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT3P12035 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT3P12035 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT3P12035 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
KRT3P12035 AL590763.1-201ENST00000398297 1545 ntBASIC5.28□□□□□ -1.56
KRT3P12035 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
KRT3P12035 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
KRT3P12035 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRT3P12035 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT3P12035 SNURFL-201ENST00000309296 343 ntBASIC5.28□□□□□ -1.56
KRT3P12035 RPL23P2-201ENST00000320371 421 ntBASIC5.28□□□□□ -1.56
KRT3P12035 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT3P12035 ATP5HP3-201ENST00000396994 486 ntBASIC5.28□□□□□ -1.56
KRT3P12035 RN7SKP229-201ENST00000410465 302 ntBASIC5.28□□□□□ -1.56
KRT3P12035 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT3P12035 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT3P12035 RAB9AP5-201ENST00000437794 597 ntBASIC5.28□□□□□ -1.56
KRT3P12035 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT3P12035 RAB9AP2-201ENST00000443911 597 ntBASIC5.28□□□□□ -1.56
KRT3P12035 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT3P12035 AC093166.2-201ENST00000455969 1017 ntBASIC5.28□□□□□ -1.56
KRT3P12035 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT3P12035 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.28□□□□□ -1.56
KRT3P12035 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT3P12035 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT3P12035 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT3P12035 RNA5SP92-201ENST00000516437 110 ntBASIC5.28□□□□□ -1.56
KRT3P12035 AC012339.2-201ENST00000523996 453 ntBASIC5.28□□□□□ -1.56
KRT3P12035 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.28□□□□□ -1.56
KRT3P12035 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT3P12035 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT3P12035 AC090022.1-201ENST00000546569 311 ntBASIC5.28□□□□□ -1.56
KRT3P12035 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
KRT3P12035 NMNAT1P1-201ENST00000554095 876 ntBASIC5.28□□□□□ -1.56
KRT3P12035 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT3P12035 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.28□□□□□ -1.56
KRT3P12035 AGGF1P9-201ENST00000561884 913 ntBASIC5.28□□□□□ -1.56
KRT3P12035 AC116553.2-201ENST00000564203 463 ntBASIC5.28□□□□□ -1.56
KRT3P12035 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRT3P12035 AC020915.5-201ENST00000596836 964 ntBASIC5.28□□□□□ -1.56
KRT3P12035 AC022387.2-201ENST00000604050 448 ntBASIC5.28□□□□□ -1.56
KRT3P12035 TAS2R6P-201ENST00000605022 826 ntBASIC5.28□□□□□ -1.56
KRT3P12035 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT3P12035 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
KRT3P12035 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRT3P12035 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT3P12035 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
KRT3P12035 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT3P12035 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRT3P12035 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT3P12035 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRT3P12035 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRT3P12035 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.27□□□□□ -1.57
KRT3P12035 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms