Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 TDGF1P1-201ENST00000445734 527 ntBASIC4.09□□□□□ -1.75
SDCBPO00560 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.09□□□□□ -1.75
SDCBPO00560 RPL23AP37-201ENST00000479658 549 ntBASIC4.09□□□□□ -1.75
SDCBPO00560 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
SDCBPO00560 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SDCBPO00560 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
SDCBPO00560 RPS4XP18-201ENST00000495480 763 ntBASIC4.09□□□□□ -1.75
SDCBPO00560 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.09□□□□□ -1.75
SDCBPO00560 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.09□□□□□ -1.75
SDCBPO00560 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SDCBPO00560 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.09□□□□□ -1.75
SDCBPO00560 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.09□□□□□ -1.75
SDCBPO00560 AC011447.4-201ENST00000587562 111 ntBASIC4.09□□□□□ -1.75
SDCBPO00560 AC087783.2-201ENST00000605070 562 ntBASIC4.09□□□□□ -1.75
SDCBPO00560 AC005377.1-201ENST00000605126 456 ntBASIC4.09□□□□□ -1.75
SDCBPO00560 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.09□□□□□ -1.75
SDCBPO00560 AC087821.1-201ENST00000623639 567 ntBASIC4.09□□□□□ -1.75
SDCBPO00560 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.09□□□□□ -1.75
SDCBPO00560 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SDCBPO00560 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SDCBPO00560 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SDCBPO00560 MAPK10-286ENST00000641208 8747 ntBASIC4.09□□□□□ -1.76
SDCBPO00560 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
SDCBPO00560 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.09□□□□□ -1.76
SDCBPO00560 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SDCBPO00560 MAPK10-303ENST00000641324 3959 ntBASIC4.08□□□□□ -1.76
SDCBPO00560 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SDCBPO00560 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SDCBPO00560 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SDCBPO00560 RNU6-171P-201ENST00000384354 107 ntBASIC4.08□□□□□ -1.76
SDCBPO00560 AL021331.1-201ENST00000402817 582 ntBASIC4.08□□□□□ -1.76
SDCBPO00560 U3.35-201ENST00000408405 208 ntBASIC4.08□□□□□ -1.76
SDCBPO00560 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SDCBPO00560 AL445487.1-201ENST00000415694 1580 ntBASIC4.08□□□□□ -1.76
SDCBPO00560 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.08□□□□□ -1.76
SDCBPO00560 RPS27P18-201ENST00000431701 247 ntBASIC4.08□□□□□ -1.76
SDCBPO00560 RPL34P20-201ENST00000442771 351 ntBASIC4.08□□□□□ -1.76
SDCBPO00560 Z80107.2-201ENST00000445127 392 ntBASIC4.08□□□□□ -1.76
SDCBPO00560 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.08□□□□□ -1.76
SDCBPO00560 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.08□□□□□ -1.76
SDCBPO00560 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.08□□□□□ -1.76
SDCBPO00560 RNA5SP43-201ENST00000516559 110 ntBASIC4.08□□□□□ -1.76
SDCBPO00560 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.08□□□□□ -1.76
SDCBPO00560 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.08□□□□□ -1.76
SDCBPO00560 OR10D4P-201ENST00000525892 951 ntBASIC4.08□□□□□ -1.76
SDCBPO00560 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SDCBPO00560 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.08□□□□□ -1.76
SDCBPO00560 TVP23CP2-201ENST00000571473 623 ntBASIC4.08□□□□□ -1.76
SDCBPO00560 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.08□□□□□ -1.76
SDCBPO00560 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.08□□□□□ -1.76
SDCBPO00560 AL121612.2-201ENST00000612261 482 ntBASIC4.08□□□□□ -1.76
SDCBPO00560 AC009163.6-201ENST00000612367 342 ntBASIC4.08□□□□□ -1.76
SDCBPO00560 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.08□□□□□ -1.76
SDCBPO00560 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
SDCBPO00560 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
SDCBPO00560 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.08□□□□□ -1.76
SDCBPO00560 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SDCBPO00560 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SDCBPO00560 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
SDCBPO00560 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SDCBPO00560 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SDCBPO00560 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SDCBPO00560 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SDCBPO00560 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SDCBPO00560 AL590763.1-201ENST00000398297 1545 ntBASIC4.07□□□□□ -1.76
SDCBPO00560 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SDCBPO00560 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SDCBPO00560 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SDCBPO00560 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SDCBPO00560 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.07□□□□□ -1.76
SDCBPO00560 AL357515.1-201ENST00000402967 542 ntBASIC4.07□□□□□ -1.76
SDCBPO00560 AL080315.1-201ENST00000406055 466 ntBASIC4.07□□□□□ -1.76
SDCBPO00560 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.07□□□□□ -1.76
SDCBPO00560 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.07□□□□□ -1.76
SDCBPO00560 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.07□□□□□ -1.76
SDCBPO00560 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.07□□□□□ -1.76
SDCBPO00560 AL163193.1-201ENST00000444895 788 ntBASIC4.07□□□□□ -1.76
SDCBPO00560 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.07□□□□□ -1.76
SDCBPO00560 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.07□□□□□ -1.76
SDCBPO00560 RN7SL319P-201ENST00000480656 221 ntBASIC4.07□□□□□ -1.76
SDCBPO00560 OR2A3P-201ENST00000493774 953 ntBASIC4.07□□□□□ -1.76
SDCBPO00560 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.07□□□□□ -1.76
SDCBPO00560 AC004980.4-201ENST00000513375 203 ntBASIC4.07□□□□□ -1.76
SDCBPO00560 RNA5SP92-201ENST00000516437 110 ntBASIC4.07□□□□□ -1.76
SDCBPO00560 RN7SKP66-201ENST00000516681 231 ntBASIC4.07□□□□□ -1.76
SDCBPO00560 Y_RNA.719-201ENST00000517156 106 ntBASIC4.07□□□□□ -1.76
SDCBPO00560 IGLV2-28-201ENST00000520681 304 ntBASIC4.07□□□□□ -1.76
SDCBPO00560 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.07□□□□□ -1.76
SDCBPO00560 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.07□□□□□ -1.76
SDCBPO00560 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.07□□□□□ -1.76
SDCBPO00560 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.07□□□□□ -1.76
SDCBPO00560 AC079075.1-201ENST00000559543 878 ntBASIC4.07□□□□□ -1.76
SDCBPO00560 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.07□□□□□ -1.76
SDCBPO00560 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.07□□□□□ -1.76
SDCBPO00560 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.07□□□□□ -1.76
SDCBPO00560 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.07□□□□□ -1.76
SDCBPO00560 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.07□□□□□ -1.76
SDCBPO00560 AC243960.7-201ENST00000623532 707 ntBASIC4.07□□□□□ -1.76
SDCBPO00560 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.07□□□□□ -1.76
SDCBPO00560 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms