Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 MORF4L1P4-201ENST00000450245 976 ntBASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 SUMO2P4-201ENST00000504193 276 ntBASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL671862.1-201ENST00000515851 349 ntBASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC021006.3-201ENST00000530771 192 ntBASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC026951.1-201ENST00000559530 2459 ntBASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC022106.2-201ENST00000620114 757 ntBASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC087385.3-201ENST00000620477 187 ntBASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 RNA5SP428-201ENST00000365129 132 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 RAB28P1-201ENST00000411517 641 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 RPL12P43-201ENST00000420608 499 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 HMGB1P32-201ENST00000425971 565 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC017019.1-201ENST00000426129 261 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 ELOCP3-201ENST00000439303 348 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 OR7E125P-201ENST00000443450 846 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL354714.3-201ENST00000447284 493 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 RN7SL481P-201ENST00000477764 299 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 RN7SL319P-201ENST00000480656 221 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC009117.1-201ENST00000563948 554 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC022884.2-201ENST00000578535 580 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC234771.5-201ENST00000600161 514 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC008814.1-201ENST00000603797 406 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC099654.6-201ENST00000636487 512 ntBASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.92□□□□□ -1.62
TMX2-CTNND1H3BSU7 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL672167.1-205ENST00000641112 3080 ntBASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC092017.2-201ENST00000427600 362 ntBASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC016772.1-201ENST00000444170 1261 ntBASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL137845.2-201ENST00000444292 988 ntBASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC112498.1-201ENST00000444401 332 ntBASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 BTF3P6-201ENST00000448054 499 ntBASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 RN7SL443P-201ENST00000464331 290 ntBASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 GAPDHP56-201ENST00000506031 988 ntBASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 GSTP1P1-201ENST00000548078 319 ntBASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms