Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 MIR133A2-201ENST00000347538 102 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 AC092570.3-201ENST00000420113 693 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 AC245028.1-201ENST00000423259 256 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 MRPS21P3-201ENST00000436696 262 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 RPL35AP21-201ENST00000437667 333 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 RPL23AP72-201ENST00000492447 435 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 RPS26P24-201ENST00000497656 331 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 AC073358.1-201ENST00000505671 684 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 AC091868.1-201ENST00000508746 304 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 OR5AN2P-201ENST00000534535 896 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 AC127024.5-201ENST00000580085 462 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 AL354950.1-201ENST00000614150 568 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 AC241377.1-201ENST00000619797 406 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 AP000346.3-201ENST00000622821 210 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 AC138627.1-204ENST00000641894 765 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 AC002525.1-201ENST00000624392 1622 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 ICE2P1-201ENST00000512800 1849 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 AL590240.1-201ENST00000334118 313 ntBASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 NACAP7-201ENST00000407371 609 ntBASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 FABP7P1-201ENST00000424004 391 ntBASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 AL451139.1-201ENST00000434718 346 ntBASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 AC016831.4-201ENST00000438302 307 ntBASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 RPL12P20-201ENST00000475538 479 ntBASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 AC005868.1-201ENST00000536421 331 ntBASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 AC093249.4-201ENST00000564755 259 ntBASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 RN7SL690P-201ENST00000582087 240 ntBASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 AC107993.1-201ENST00000591343 684 ntBASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 AL442639.1-201ENST00000625030 1899 ntBASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM28A0A1B0GU29 AC092376.2-201ENST00000622621 4116 ntBASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 AC007382.1-201ENST00000624376 2618 ntBASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 AC007738.1-201ENST00000413892 348 ntBASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 AC119751.6-201ENST00000416712 186 ntBASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 OR6C71P-201ENST00000432580 913 ntBASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 RNU2-30P-201ENST00000516209 141 ntBASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 RNU1-6P-201ENST00000516290 144 ntBASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 OR5M2P-201ENST00000529003 936 ntBASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 420.7 ms