Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC104229.1-201ENST00000561364 255 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC018714.1-201ENST00000605028 208 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 YWHAEP7-203ENST00000622054 312 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC025048.6-202ENST00000627667 438 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 PCMTD1P7-201ENST00000634506 357 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 ZNF33BP1-201ENST00000452497 1834 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 NPL-212ENST00000614468 2376 ntTSL 5 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 PABPC1P8-201ENST00000452851 2086 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 RNU6-534P-201ENST00000364877 106 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 Y_RNA.422-201ENST00000384054 114 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 RNA5SP198-201ENST00000410376 127 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 SETP9-201ENST00000423837 832 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 GTF2IP2-201ENST00000424290 697 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 PSMD10P2-201ENST00000432890 672 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 PSPHP1-201ENST00000450062 261 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 RN7SL221P-201ENST00000466190 281 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 AC096754.1-201ENST00000508904 818 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 SNX18P23-201ENST00000510867 677 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 HSD3BP3-201ENST00000514706 994 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 RN7SL199P-201ENST00000578752 281 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 RN7SL656P-201ENST00000579044 281 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 RN7SL270P-201ENST00000579643 281 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 AC022400.9-201ENST00000623633 273 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 AC008957.3-201ENST00000624112 2242 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 DLEU2L-201ENST00000371086 3555 ntBASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC8.57□□□□□ -1.04
PDZRN3Q9UPQ7 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AL512329.1-201ENST00000404600 1592 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 HSPD1P7-201ENST00000447985 1686 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 UBE2Q2P1-202ENST00000354771 883 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 Y_RNA.402-201ENST00000383972 102 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 MIR541-201ENST00000401360 84 ntBASIC8.56□□□□□ -1.04
PDZRN3Q9UPQ7 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms