Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 AP000580.1-201ENST00000404439 358 ntBASIC6.12□□□□□ -1.43
SCN11AQ9UI33 AC021660.1-201ENST00000465006 554 ntBASIC6.12□□□□□ -1.43
SCN11AQ9UI33 MYL12BP2-201ENST00000503948 512 ntBASIC6.12□□□□□ -1.43
SCN11AQ9UI33 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 RN7SL652P-201ENST00000577769 300 ntBASIC6.12□□□□□ -1.43
SCN11AQ9UI33 AC125494.2-201ENST00000602431 657 ntBASIC6.12□□□□□ -1.43
SCN11AQ9UI33 RPL26P30-202ENST00000602923 645 ntBASIC6.12□□□□□ -1.43
SCN11AQ9UI33 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 ADAM5-202ENST00000399789 1942 ntBASIC6.11□□□□□ -1.43
SCN11AQ9UI33 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 OR1F12-201ENST00000402365 945 ntBASIC6.11□□□□□ -1.43
SCN11AQ9UI33 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 BNIP3P22-201ENST00000593399 556 ntBASIC6.11□□□□□ -1.43
SCN11AQ9UI33 AC012409.3-201ENST00000611343 981 ntBASIC6.11□□□□□ -1.43
SCN11AQ9UI33 AC114781.5-201ENST00000615297 108 ntBASIC6.11□□□□□ -1.43
SCN11AQ9UI33 OR14L1P-202ENST00000641545 3009 ntBASIC6.11□□□□□ -1.43
SCN11AQ9UI33 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.11□□□□□ -1.43
SCN11AQ9UI33 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 RNA5SP515-201ENST00000364570 118 ntBASIC6.11□□□□□ -1.43
SCN11AQ9UI33 MIR134-201ENST00000385258 73 ntBASIC6.11□□□□□ -1.43
SCN11AQ9UI33 AC007738.1-201ENST00000413892 348 ntBASIC6.11□□□□□ -1.43
SCN11AQ9UI33 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 MTND4LP2-201ENST00000502312 285 ntBASIC6.11□□□□□ -1.43
SCN11AQ9UI33 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SCN11AQ9UI33 AC090181.2-201ENST00000602975 672 ntBASIC6.11□□□□□ -1.43
SCN11AQ9UI33 AC002044.3-201ENST00000623314 541 ntBASIC6.11□□□□□ -1.43
SCN11AQ9UI33 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SCN11AQ9UI33 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.1□□□□□ -1.43
SCN11AQ9UI33 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SCN11AQ9UI33 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SCN11AQ9UI33 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SCN11AQ9UI33 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.1□□□□□ -1.43
SCN11AQ9UI33 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SCN11AQ9UI33 AC006065.1-201ENST00000422539 802 ntBASIC6.1□□□□□ -1.43
SCN11AQ9UI33 RPL5P2-201ENST00000429598 854 ntBASIC6.1□□□□□ -1.43
SCN11AQ9UI33 RPL12P28-201ENST00000430852 489 ntBASIC6.1□□□□□ -1.43
SCN11AQ9UI33 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.1□□□□□ -1.43
SCN11AQ9UI33 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.1□□□□□ -1.43
SCN11AQ9UI33 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.1□□□□□ -1.43
SCN11AQ9UI33 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.1□□□□□ -1.43
SCN11AQ9UI33 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.1□□□□□ -1.43
SCN11AQ9UI33 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.1□□□□□ -1.43
SCN11AQ9UI33 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SCN11AQ9UI33 AC069366.1-201ENST00000583159 838 ntBASIC6.1□□□□□ -1.43
SCN11AQ9UI33 AL590392.1-201ENST00000604960 446 ntBASIC6.1□□□□□ -1.43
SCN11AQ9UI33 AL445423.1-201ENST00000609941 536 ntBASIC6.1□□□□□ -1.43
SCN11AQ9UI33 AC006338.2-201ENST00000616864 791 ntBASIC6.1□□□□□ -1.43
SCN11AQ9UI33 AL121890.3-201ENST00000618494 516 ntBASIC6.1□□□□□ -1.43
SCN11AQ9UI33 AP000843.1-201ENST00000624880 701 ntBASIC6.1□□□□□ -1.43
SCN11AQ9UI33 AL591135.1-201ENST00000401578 5914 ntBASIC6.1□□□□□ -1.43
SCN11AQ9UI33 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.1□□□□□ -1.43
SCN11AQ9UI33 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SCN11AQ9UI33 AP001029.2-203ENST00000589795 4910 ntBASIC6.1□□□□□ -1.43
SCN11AQ9UI33 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC6.1□□□□□ -1.43
SCN11AQ9UI33 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SCN11AQ9UI33 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SCN11AQ9UI33 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.09□□□□□ -1.43
SCN11AQ9UI33 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SCN11AQ9UI33 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SCN11AQ9UI33 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.09□□□□□ -1.43
SCN11AQ9UI33 U3.35-201ENST00000408405 208 ntBASIC6.09□□□□□ -1.43
SCN11AQ9UI33 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.09□□□□□ -1.43
SCN11AQ9UI33 RPS3AP54-201ENST00000435535 734 ntBASIC6.09□□□□□ -1.43
SCN11AQ9UI33 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.09□□□□□ -1.43
SCN11AQ9UI33 RPL7AP52-201ENST00000458096 790 ntBASIC6.09□□□□□ -1.43
SCN11AQ9UI33 AC093840.1-201ENST00000511599 336 ntBASIC6.09□□□□□ -1.43
SCN11AQ9UI33 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.09□□□□□ -1.43
SCN11AQ9UI33 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.09□□□□□ -1.43
SCN11AQ9UI33 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SCN11AQ9UI33 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.09□□□□□ -1.43
SCN11AQ9UI33 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.09□□□□□ -1.43
SCN11AQ9UI33 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms