Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL672167.3-201ENST00000465951 960 ntBASIC6.55□□□□□ -1.36
NPC1L1Q9UHC9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6.55□□□□□ -1.36
NPC1L1Q9UHC9 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.55□□□□□ -1.36
NPC1L1Q9UHC9 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NPC1L1Q9UHC9 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.55□□□□□ -1.36
NPC1L1Q9UHC9 AC091042.1-201ENST00000579213 173 ntBASIC6.55□□□□□ -1.36
NPC1L1Q9UHC9 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.55□□□□□ -1.36
NPC1L1Q9UHC9 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.55□□□□□ -1.36
NPC1L1Q9UHC9 SOCS5P3-201ENST00000425115 1576 ntBASIC6.55□□□□□ -1.36
NPC1L1Q9UHC9 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 OR9K1P-202ENST00000641111 3217 ntBASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 AC010132.2-201ENST00000295493 1043 ntBASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 RNU6-233P-201ENST00000410845 141 ntBASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 OR5M12P-201ENST00000423388 929 ntBASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 AC008072.1-201ENST00000434254 824 ntBASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 GTF3AP5-201ENST00000442645 697 ntBASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 AC093166.2-201ENST00000455969 1017 ntBASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 AC011005.3-201ENST00000491624 395 ntBASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 AC020890.1-201ENST00000491837 504 ntBASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 AC009852.2-201ENST00000567898 485 ntBASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 CYCSP40-201ENST00000575927 294 ntBASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.54□□□□□ -1.36
NPC1L1Q9UHC9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 ARHGAP42P3-201ENST00000443989 2508 ntBASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 AL121950.1-201ENST00000624993 2077 ntBASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 RNA5SP191-201ENST00000362585 102 ntBASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 RGS17P1-201ENST00000423358 553 ntBASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 AL451139.1-201ENST00000434718 346 ntBASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 AC010733.1-201ENST00000451515 401 ntBASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 AC234781.3-201ENST00000452540 973 ntBASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 RNU1-6P-201ENST00000516290 144 ntBASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 OR51C1P-201ENST00000608504 942 ntBASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPC1L1Q9UHC9 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 AP001284.1-201ENST00000528393 2118 ntBASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 MIR192-201ENST00000384915 110 ntBASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 SNORA11-201ENST00000408789 128 ntBASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 EIF4HP2-201ENST00000424380 563 ntBASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 AC091390.1-201ENST00000433904 331 ntBASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 AC005154.2-201ENST00000438110 379 ntBASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 AL136455.1-201ENST00000441083 1240 ntBASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 RN7SL205P-201ENST00000490174 284 ntBASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 AC093249.4-201ENST00000564755 259 ntBASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 RN7SL52P-201ENST00000584271 284 ntBASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 RN7SL722P-201ENST00000617780 284 ntBASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 RN7SL565P-201ENST00000618246 284 ntBASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
NPC1L1Q9UHC9 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms