Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 MTATP6P18-201ENST00000417994 673 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AC244505.2-201ENST00000435089 759 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 RPS3AP54-201ENST00000435535 734 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 RPEP4-201ENST00000437636 602 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AC123904.1-201ENST00000441072 368 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 RN7SL372P-201ENST00000461982 298 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 RPL19P11-201ENST00000495944 589 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AC018992.1-201ENST00000523778 2149 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AC010287.1-201ENST00000566916 357 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 RPS7P1-201ENST00000571702 585 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AC024267.2-201ENST00000582737 417 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AC008966.2-201ENST00000606157 453 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AL133173.2-201ENST00000614270 90 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AC079684.1-201ENST00000621405 437 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 SNORA43.5-201ENST00000631270 138 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AL356585.10-201ENST00000641883 123 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 DDX10P2-201ENST00000417796 2614 ntBASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
LIMD1Q9UGP4 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 Y_RNA.394-201ENST00000383942 103 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AL354719.1-201ENST00000406535 843 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 RPL12P9-201ENST00000412942 488 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 VN1R36P-201ENST00000414936 291 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AC017078.1-201ENST00000416146 368 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 OR10T1P-201ENST00000424327 947 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 RPL35AP12-201ENST00000425362 338 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 MTND6P18-201ENST00000439477 513 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AC079781.1-201ENST00000441505 394 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 CYCSP44-201ENST00000448560 313 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 RPS23P9-201ENST00000448848 438 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 RPL23AP12-201ENST00000467573 473 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AL355032.1-201ENST00000472981 438 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 RN7SL350P-201ENST00000492591 299 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 OR7E163P-201ENST00000505943 894 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 IGKV2-36-201ENST00000519999 223 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AF279873.1-201ENST00000523393 313 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 PMS2P3-207ENST00000529061 717 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AL135978.1-201ENST00000553618 1266 ntBASIC7.67□□□□□ -1.18
LIMD1Q9UGP4 AL109766.1-201ENST00000555080 552 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms