Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 CDY3P-201ENST00000454543 1618 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 SNORA70-201ENST00000384436 135 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AP002530.1-201ENST00000405705 684 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 RPS26P4-201ENST00000431743 355 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AL451139.1-201ENST00000434718 346 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AL591473.1-201ENST00000464297 313 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 RN7SL558P-201ENST00000497468 299 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AC138938.1-201ENST00000515431 782 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 RN7SKP46-201ENST00000515942 234 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 RNU6-513P-201ENST00000516104 104 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 RNA5SP34-201ENST00000516887 130 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 RNU6-709P-201ENST00000517257 104 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AC090022.1-201ENST00000546569 311 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 MIR3691-201ENST00000578066 90 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AP001521.2-201ENST00000608772 546 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AL139407.1-201ENST00000613826 1175 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 EIF3FP1-201ENST00000613970 806 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 MTCO1P46-201ENST00000451639 1491 ntBASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
VPS29Q9UBQ0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VPS29Q9UBQ0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VPS29Q9UBQ0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
VPS29Q9UBQ0 DHX9P1-201ENST00000436565 3076 ntBASIC4.65□□□□□ -1.66
VPS29Q9UBQ0 U8.4-201ENST00000363626 134 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 RNU1-106P-201ENST00000384382 164 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AP000580.1-201ENST00000404439 358 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 U3.35-201ENST00000408405 208 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AC234781.4-201ENST00000419384 244 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 E2F6P2-201ENST00000420708 748 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 SETP10-201ENST00000424368 814 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AC004938.1-201ENST00000438468 308 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 MTND6P5-201ENST00000448266 512 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 OTX2P1-201ENST00000450956 354 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 CYCSP34-201ENST00000458172 304 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 RPS26P39-201ENST00000469206 341 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AC140172.1-201ENST00000502928 141 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AC073358.1-201ENST00000505671 684 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 MRPS33P2-201ENST00000507850 322 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AL671862.1-201ENST00000515851 349 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 RN7SKP147-201ENST00000517154 244 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AC013701.1-201ENST00000522657 465 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 SETP1-201ENST00000556014 845 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AL049839.1-201ENST00000556151 657 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AC087477.6-201ENST00000559595 843 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AL121932.1-201ENST00000605542 214 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 MIR6826-201ENST00000617808 98 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AC015871.5-202ENST00000623252 701 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms