Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC015804.1-201ENST00000622935 435 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 AC099494.2-201ENST00000623371 978 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 AP003072.5-201ENST00000623872 773 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 OR52B5P-202ENST00000641118 1110 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 CASC19-264ENST00000641912 1184 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 SSXP3-201ENST00000442971 1300 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 AL359922.3-201ENST00000624779 1670 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 MAPK10-349ENST00000641767 3661 ntBASIC4.62□□□□□ -1.67
VAPAQ9P0L0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AL357515.1-201ENST00000402967 542 ntBASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AL136116.2-201ENST00000404020 785 ntBASIC4.62□□□□□ -1.67
VAPAQ9P0L0 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AL513325.1-201ENST00000417716 1034 ntBASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AC104843.2-201ENST00000427666 297 ntBASIC4.62□□□□□ -1.67
VAPAQ9P0L0 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AC004938.1-201ENST00000438468 308 ntBASIC4.62□□□□□ -1.67
VAPAQ9P0L0 SPRYD7P1-201ENST00000443861 570 ntBASIC4.62□□□□□ -1.67
VAPAQ9P0L0 TDGF1P1-201ENST00000445734 527 ntBASIC4.62□□□□□ -1.67
VAPAQ9P0L0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AC000111.2-201ENST00000448200 210 ntBASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AC011225.1-201ENST00000457751 369 ntBASIC4.62□□□□□ -1.67
VAPAQ9P0L0 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AC097484.1-201ENST00000471148 389 ntBASIC4.62□□□□□ -1.67
VAPAQ9P0L0 Y_RNA.719-201ENST00000517156 106 ntBASIC4.62□□□□□ -1.67
VAPAQ9P0L0 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 NMNAT1P1-201ENST00000554095 876 ntBASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 AL357153.4-201ENST00000620487 1016 ntBASIC4.62□□□□□ -1.67
VAPAQ9P0L0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 CR383656.5-201ENST00000547616 1340 ntBASIC4.62□□□□□ -1.67
VAPAQ9P0L0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
VAPAQ9P0L0 CASC19-281ENST00000642118 1554 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 THAP12P8-201ENST00000447914 2115 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AC008758.3-201ENST00000507003 1829 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 RNA5SP242-201ENST00000364171 118 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 SNORA17A-201ENST00000391185 133 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 SMC4P1-201ENST00000414479 527 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 MTND4LP21-201ENST00000415303 295 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 DDX39BP1-205ENST00000422507 192 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AC244033.1-201ENST00000426826 870 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 CFL1P1-202ENST00000432948 411 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 VN1R96P-201ENST00000446052 858 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 OTX2P1-201ENST00000450956 354 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 OR9N1P-201ENST00000491296 333 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 RNA5SP43-201ENST00000516559 110 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 HMGB1P19-201ENST00000517578 577 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AL161912.3-201ENST00000605404 628 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AC097505.1-201ENST00000610199 565 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AL121890.2-201ENST00000617644 465 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 MIR6778-201ENST00000617912 73 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AC019206.1-201ENST00000621938 425 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AC012414.7-202ENST00000622705 1090 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AP002505.2-201ENST00000623585 696 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 SNORA17.5-201ENST00000630429 132 ntBASIC4.61□□□□□ -1.67
VAPAQ9P0L0 AC006453.5-201ENST00000636451 619 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms