Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MIR8082-201ENST00000612488 81 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 MIR6070-201ENST00000613967 103 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC005899.6-201ENST00000620729 297 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 RMST_7.1-201ENST00000621935 268 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AC006116.1-201ENST00000587908 2171 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AC011008.2-201ENST00000624866 3352 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AC022507.1-201ENST00000548349 1505 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 OR2AH1P-202ENST00000641232 2744 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 RNU6-433P-201ENST00000363216 104 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 SNORA73B-201ENST00000363217 204 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 RN7SKP174-201ENST00000363803 330 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 SNORA62.2-201ENST00000364672 152 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 RNU6-784P-201ENST00000384330 106 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 SNORA68-201ENST00000384437 133 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 RNA5SP35-201ENST00000391257 129 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AC008171.1-201ENST00000395058 200 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 RPS24P12-201ENST00000402084 394 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 MIR1284-201ENST00000408337 120 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 OR9R1P-201ENST00000412200 877 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AC009413.1-201ENST00000414823 399 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 NIP7P1-201ENST00000433227 512 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 Z83313.1-201ENST00000433780 718 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 MTND6P18-201ENST00000439477 513 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 PGBD4P3-201ENST00000440731 581 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 ARL2BPP10-201ENST00000446487 531 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 GAPDHP17-201ENST00000449858 1001 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 TAAR3P-201ENST00000466706 1078 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 TAAR3P-202ENST00000481759 1025 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 RN7SKP31-201ENST00000516354 278 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AC022878.1-201ENST00000530684 149 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 BMS1P15-201ENST00000554269 1141 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AL358913.1-201ENST00000554342 121 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 RN7SL835P-201ENST00000579920 262 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 SNRPGP17-201ENST00000603780 214 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AL121985.3-201ENST00000620690 523 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AL162377.2-201ENST00000624532 337 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AC093591.3-201ENST00000634516 308 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 OR5M2P-202ENST00000641241 4242 ntBASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms