Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC023424.1-201ENST00000496058 459 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AC006499.3-201ENST00000506077 748 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AC090079.2-201ENST00000575289 768 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 MIR4472-2-201ENST00000582069 67 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 MIR3936-201ENST00000584304 110 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 OR8G7P-201ENST00000616658 848 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AC019206.1-201ENST00000621938 425 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AC015871.5-202ENST00000623252 701 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AC080188.3-201ENST00000624842 748 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 SMG1P6-201ENST00000532337 2930 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 SNORA70-201ENST00000384436 135 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 MIR765-201ENST00000390226 114 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 ARL4AP5-201ENST00000404372 599 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 RNU2-72P-201ENST00000411175 163 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 AL121878.1-201ENST00000418638 859 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 E2F6P2-201ENST00000420708 748 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 OR6C72P-201ENST00000451403 892 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 RN7SL319P-201ENST00000480656 221 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 AC116562.1-201ENST00000485355 781 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 RN7SL558P-201ENST00000497468 299 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 AC093763.2-201ENST00000505334 1223 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 RN7SKP5-201ENST00000517045 272 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 Y_RNA.719-201ENST00000517156 106 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 RNU6-709P-201ENST00000517257 104 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 AC013701.1-201ENST00000522657 465 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 AC025423.2-201ENST00000537570 439 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 AC093249.4-201ENST00000564755 259 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 AC015802.5-201ENST00000607478 399 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 MIR8069-1-201ENST00000616627 86 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 MIR8069-2-201ENST00000621412 86 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 AC006453.5-201ENST00000636451 619 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 AC024341.1-201ENST00000526444 1552 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 C4BPAP1-201ENST00000415474 1893 ntBASIC5.24□□□□□ -1.57
SIX2Q9NPC8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.24□□□□□ -1.57
SIX2Q9NPC8 OR51C1P-202ENST00000641159 1444 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AL731566.1-201ENST00000620490 1937 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 THAP12P8-201ENST00000447914 2115 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 RN7SKP95-201ENST00000362860 303 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 OR6K3-202ENST00000368146 996 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 RNU6-564P-201ENST00000410983 104 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 GTF3AP1-201ENST00000416942 1004 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 SDR42E1P3-201ENST00000438345 502 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 OR52Y1P-201ENST00000452418 828 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AC110775.1-201ENST00000513721 462 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 RN7SKP147-201ENST00000517154 244 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 OR8K2P-201ENST00000524645 927 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 MORF4L1P3-201ENST00000525966 950 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms