Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 ACTR3BP5-201ENST00000448440 1479 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 Y_RNA.5-201ENST00000362334 102 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 AC093392.1-201ENST00000366280 340 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 RN7SKP222-201ENST00000410651 315 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 RN7SKP144-201ENST00000411108 279 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 PPIAP25-201ENST00000420177 540 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 FTH1P20-201ENST00000434913 548 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 AL450996.1-201ENST00000445574 1202 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 EIF4EBP2P1-201ENST00000450009 343 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 HMGB1P7-201ENST00000450921 612 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 AC104308.1-201ENST00000454621 333 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 AC002075.1-201ENST00000457396 676 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 AC026410.2-201ENST00000460281 156 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 AC026254.1-201ENST00000479473 431 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 MEG8-218ENST00000556720 456 ntTSL 3 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 SULT1C2P1-202ENST00000562418 459 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 AL049829.3-202ENST00000604278 711 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 PRR13P7-201ENST00000605538 430 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 AC022893.3-201ENST00000607665 437 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 MED15P6-202ENST00000621415 787 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 AC108724.2-201ENST00000634593 290 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 ENSA-215ENST00000638926 360 ntTSL 5 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 AP003119.3-201ENST00000566747 4192 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 AC087045.3-201ENST00000623046 2468 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 LINC00294-201ENST00000631190 3306 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 DDX18P4-201ENST00000511690 1966 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USB1Q9BQ65 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USB1Q9BQ65 USP9YP4-201ENST00000424401 1745 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 MAPK10-270ENST00000641102 3538 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USB1Q9BQ65 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USB1Q9BQ65 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 RBMX2P2-201ENST00000257020 946 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 RNU1-35P-201ENST00000362782 153 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 RNU6-26P-201ENST00000383985 107 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 Y_RNA.556-201ENST00000384677 113 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 RPL7P60-201ENST00000397636 735 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC137499.1-201ENST00000427602 88 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 HMGB3P11-201ENST00000440127 604 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 TRAPPC2P3-201ENST00000443200 321 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 MORF4-201ENST00000447135 971 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms