Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 RN7SKP275-201ENST00000364626 301 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AC093719.1-202ENST00000392735 373 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 HMGB1P10-201ENST00000395823 563 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 VDAC2P1-201ENST00000399358 958 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 RNA5SP487-201ENST00000410186 122 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 ARL2BPP3-201ENST00000421226 480 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 MORF4L1P7-201ENST00000426038 703 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AC023141.6-201ENST00000429418 337 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 MTND2P30-201ENST00000456663 382 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AC008410.1-201ENST00000483777 339 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AC005912.1-201ENST00000495392 255 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 NIFKP7-201ENST00000503365 834 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 MTND6P2-201ENST00000512226 524 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AC093014.1-201ENST00000548926 724 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AC123786.2-201ENST00000603459 275 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 PPATP2-201ENST00000605635 508 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AC048341.3-201ENST00000619323 491 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 MIR6839-201ENST00000620425 113 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AP000756.2-201ENST00000624168 2567 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AC114947.2-201ENST00000565748 2125 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AL731532.2-201ENST00000623542 1953 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 RNU6-452P-201ENST00000384406 107 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 RNU6-178P-201ENST00000384631 104 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 RPL6P29-201ENST00000414863 865 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AL662874.1-201ENST00000426065 230 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC073508.1-201ENST00000428866 656 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC124944.2-201ENST00000429866 1242 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 ARL4AP4-201ENST00000434170 518 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC092013.1-201ENST00000438795 332 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 CYCSP24-201ENST00000445119 316 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AL591623.2-201ENST00000449978 222 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 RPL7P48-201ENST00000461513 746 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AP000942.1-201ENST00000463969 747 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 NPM1P17-201ENST00000479221 602 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC022133.1-201ENST00000490961 571 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 RPL37AP8-201ENST00000494116 276 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS33AQ96AX1 RFPL4AP5-201ENST00000514977 504 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 RN7SKP141-201ENST00000516167 338 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 SNORA43.3-201ENST00000517240 103 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AC022360.1-201ENST00000521058 340 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AP004607.2-201ENST00000533949 322 ntBASIC5.11□□□□□ -1.59
VPS33AQ96AX1 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms