Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SNORA11.2-201ENST00000408318 127 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 UQCRBP1-201ENST00000421129 336 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 AC090804.1-201ENST00000448870 490 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 FTH1P21-201ENST00000512179 511 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 OR8R1P-201ENST00000543943 764 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 AC019206.1-201ENST00000621938 425 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 LRRC37A9P-201ENST00000603850 5376 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 ERVFRD-3-201ENST00000578561 1617 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 AL117339.2-201ENST00000430475 180 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 RPS17P8-201ENST00000434525 335 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 AC106806.2-201ENST00000509365 500 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 MIR5699-201ENST00000578903 90 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 AL133338.2-201ENST00000604292 736 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 MIR6839-201ENST00000620425 113 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 AC012213.2-201ENST00000562917 4597 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 NOL8P1-201ENST00000508336 3529 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 SNORA48.4-201ENST00000391089 134 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AL607077.1-201ENST00000401718 499 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 RPL36AP36-201ENST00000418616 301 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 RPL7AP61-201ENST00000443410 636 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 Z95327.1-201ENST00000446082 482 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 GAPDHP14-201ENST00000450472 937 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 RPL36AP41-201ENST00000493820 306 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AC073073.1-201ENST00000493920 463 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 RNA5SP196-201ENST00000625967 102 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AP001029.2-203ENST00000589795 4910 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AC006484.1-201ENST00000435086 1884 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 SNORA70.10-201ENST00000384515 134 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AC084783.1-201ENST00000565846 910 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AC034229.5-201ENST00000624258 185 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 HSFY6P-201ENST00000445573 403 ntBASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
ALMS1Q8TCU4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms