Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC109462.1-201ENST00000491087 368 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 RN7SL346P-201ENST00000491561 294 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 RN7SKP66-201ENST00000516681 231 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 OR10G5P-201ENST00000532733 358 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 MIR3691-201ENST00000578066 90 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 AL627230.1-201ENST00000613077 211 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 AL049794.2-201ENST00000616301 365 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 AL591926.8-201ENST00000616876 211 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 RNU1-106P-201ENST00000384382 164 ntBASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AC073052.1-201ENST00000440417 714 ntBASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 GTF3AP5-201ENST00000442645 697 ntBASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AC012512.1-201ENST00000446594 718 ntBASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 RPS6P2-201ENST00000454208 705 ntBASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 GYG1P1-201ENST00000460864 698 ntBASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 RN7SL727P-201ENST00000482164 296 ntBASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AC004980.4-201ENST00000513375 203 ntBASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 EIF4A2P5-201ENST00000529914 499 ntBASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AC005377.1-201ENST00000605126 456 ntBASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 AC093799.2-201ENST00000610062 578 ntBASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC65Q8IXS2 C4BPAP1-201ENST00000415474 1893 ntBASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 CR788268.1-201ENST00000603931 1809 ntBASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 AL137845.2-201ENST00000444292 988 ntBASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 BTF3P6-201ENST00000448054 499 ntBASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 TPT1P1-201ENST00000458495 518 ntBASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 AC008953.1-201ENST00000497334 318 ntBASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 AP006245.2-201ENST00000522004 300 ntBASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 TVP23CP2-201ENST00000571473 623 ntBASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 MIR4691-201ENST00000583764 85 ntBASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 AC104687.2-201ENST00000604442 342 ntBASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 AC019206.1-201ENST00000621938 425 ntBASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms