Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 RN7SL222P-201ENST00000476452 299 ntBASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 RPS18P6-201ENST00000476880 458 ntBASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 RN7SL244P-201ENST00000493405 297 ntBASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 HIGD1AP14-201ENST00000507617 282 ntBASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 AC125612.1-201ENST00000547580 377 ntBASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 OR11J2P-201ENST00000555298 907 ntBASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 TAS2R6P-201ENST00000605022 826 ntBASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 AC104260.2-201ENST00000623551 3497 ntBASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDKL3Q8IVW4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 DDX18P5-201ENST00000534547 1306 ntBASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 AL078599.1-201ENST00000402075 293 ntBASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 Z97832.1-201ENST00000402490 328 ntBASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 AL356968.2-201ENST00000412769 1257 ntBASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 SNRPFP2-201ENST00000440710 251 ntBASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 CNOT7P2-201ENST00000441051 832 ntBASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 AC090686.1-201ENST00000481577 749 ntBASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 RN7SL591P-201ENST00000496150 292 ntBASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 AC022832.1-201ENST00000530718 645 ntBASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 AC092490.3-201ENST00000545370 572 ntBASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 MIR3176-201ENST00000582210 90 ntBASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 AL627230.1-201ENST00000613077 211 ntBASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 AL591926.8-201ENST00000616876 211 ntBASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 AC087821.1-201ENST00000623639 567 ntBASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 MAPK10-320ENST00000641462 6696 ntBASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDKL3Q8IVW4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 AC021242.1-201ENST00000507315 2035 ntBASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 RN7SKP74-201ENST00000362849 309 ntBASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 SNORA51.1-201ENST00000363243 140 ntBASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 RNA5SP455-201ENST00000365190 119 ntBASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 AL021331.1-201ENST00000402817 582 ntBASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 RN7SKP247-201ENST00000411094 308 ntBASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 AC079355.1-201ENST00000421770 223 ntBASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 RPL36AP10-201ENST00000421785 322 ntBASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 AL450263.2-201ENST00000439400 589 ntBASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDKL3Q8IVW4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms