Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 GYG1P1-201ENST00000460864 698 ntBASIC5.26□□□□□ -1.57
CCDC50Q8IVM0 AC113430.1-201ENST00000506872 718 ntBASIC5.26□□□□□ -1.57
CCDC50Q8IVM0 AC021146.3-201ENST00000511911 260 ntBASIC5.26□□□□□ -1.57
CCDC50Q8IVM0 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC50Q8IVM0 IGLVIV-64-201ENST00000518581 301 ntBASIC5.26□□□□□ -1.57
CCDC50Q8IVM0 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC50Q8IVM0 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.26□□□□□ -1.57
CCDC50Q8IVM0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC50Q8IVM0 AC068446.1-201ENST00000556425 1549 ntBASIC5.26□□□□□ -1.57
CCDC50Q8IVM0 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCDC50Q8IVM0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC50Q8IVM0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC50Q8IVM0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 BMS1P3-201ENST00000372011 932 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 SNORA70.10-201ENST00000384515 134 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 RPS24P12-201ENST00000402084 394 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 FABP7P2-201ENST00000429946 379 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 BX323845.1-201ENST00000432417 179 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 AL450263.2-201ENST00000439400 589 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 AL691482.1-201ENST00000453255 87 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 OR2AO1P-201ENST00000476497 403 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 RPL23AP37-201ENST00000479658 549 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 AC073073.1-201ENST00000493920 463 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 AC010350.1-201ENST00000504908 231 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 RNA5SP249-201ENST00000516127 99 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 AP002373.2-201ENST00000541631 1060 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 RPL26P30-202ENST00000602923 645 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 AC009237.17-201ENST00000618111 748 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 CASC19-264ENST00000641912 1184 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 AC123912.3-201ENST00000600907 1367 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 AC092435.4-201ENST00000623012 4159 ntBASIC5.25□□□□□ -1.57
CCDC50Q8IVM0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 U3.25-201ENST00000391209 220 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 SNORA77-201ENST00000408716 125 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 RN7SKP114-201ENST00000410327 279 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 RNA5SP146-201ENST00000410743 123 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 AC004690.1-201ENST00000418216 328 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 AC234781.4-201ENST00000419384 244 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 E2F6P2-201ENST00000420708 748 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 AC073052.1-201ENST00000440417 714 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 EIF2S2P5-201ENST00000457635 968 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 PGAM1P13-201ENST00000507497 754 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 STMN1P2-201ENST00000508435 439 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 AC027308.1-201ENST00000517993 110 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 AL512310.9-201ENST00000553311 948 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 AL008729.2-201ENST00000606393 473 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 AC005332.5-201ENST00000591222 2919 ntBASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC50Q8IVM0 OR14L1P-202ENST00000641545 3009 ntBASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC50Q8IVM0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms